RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 MZB1Q8WU39 189 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 RAB2BQ8WUD1 216 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 R3HDMLQ9H3Y0 253 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 REEP4Q9H6H4 257 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 C14orf105Q9NVL8 296 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 SLC2A6Q9UGQ3 507 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 TSR3Q9UJK0 312 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 FADS3Q9Y5Q0 445 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 A0A1W2PRB8 838 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 TTC24A2A3L6 582 aaPredicted RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 E2F3O00716 465 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 SMAD6O43541 496 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CCDC159P0C7I6 412 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 STK19P49842 368 aaPredicted RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 SLBPQ14493 270 aaKnown RBP eCLIP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 KIAA2026Q5HYC2 2103 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 DEPDC1Q5TB30 811 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 NADSYN1Q6IA69 706 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 RSPO2Q6UXX9 243 aaPredicted RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 RTL4Q6ZR62 310 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 PLD3Q8IV08 490 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 GPR26Q8NDV2 337 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CYB5D2Q8WUJ1 264 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 TMEM245Q9H330 911 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CCM2LQ9NUG4 571 aaPredicted RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 ARL8BQ9NVJ2 186 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CLN6Q9NWW5 311 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 PIAS3Q9Y6X2 628 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 SAGE2PA6NJ88 616 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 OR1F1O43749 312 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 PDE5AO76074 875 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 IFNGP01579 166 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 G6PDP11413 515 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CYP4F3Q08477 520 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 ZNF234Q14588 700 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 DUOXA1Q1HG43 343 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 C16orf87Q6PH81 154 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 RFWD2Q8NHY2 731 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 MVB12AQ96EY5 273 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 RACGAP1Q9H0H5 632 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 TMEM184CQ9NVA4 438 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 C19orf25Q9UFG5 118 aaPredicted RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 TMX2-CTNND1H3BSU7 103 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 ZMPSTE24O75844 475 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 FADS2O95864 444 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 KLK3P07288 261 aaPredicted RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 PBLDP30039 288 aaPredicted RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 DNAJA1P31689 397 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 TDGQ13569 410 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CRTC1Q6UUV9 634 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 PACS2Q86VP3 889 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 DAZLQ92904 295 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 BIRC8Q96P09 236 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 OR52B2Q96RD2 323 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 SORT1Q99523 831 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 ABCG4Q9H172 646 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 DNMT3BQ9UBC3 853 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CAPN14A8MX76 684 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 TMCC2O75069 709 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 C9P02748 559 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 BCKDHAP12694 445 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CDH3P22223 829 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 IDH2P48735 452 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 KHKP50053 298 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CDK9P50750 372 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 ST3GAL3Q11203 375 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 SERTAD2Q14140 314 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 BCL7AQ4VC05 210 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 IFI44LQ53G44 452 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 PIGGQ5H8A4 983 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 DCST1Q5T197 706 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 BHLHA9Q7RTU4 235 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 TMCO2Q7Z6W1 182 aaPredicted RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 UBALD2Q8IYN6 164 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 GPR156Q8NFN8 814 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 UBTD2Q8WUN7 234 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 TRUB1Q8WWH5 349 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 LINC01599Q8WXQ3 324 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 ZIC5Q96T25 663 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 NPAS2Q99743 824 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 KCNN2Q9H2S1 579 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 OR10H1Q9Y4A9 318 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 HS3ST3A1Q9Y663 406 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 SDHDO14521 159 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CASC3O15234 703 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 HPRP00739 348 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 KRT8P05787 483 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CLCN7P51798 805 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 ARSFP54793 590 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 PRDX1Q06830 199 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 SBSNQ6UWP8 590 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 OR4K14Q8NGD5 310 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 G6PC3Q9BUM1 346 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 ACAT2Q9BWD1 397 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 SYNDIG1Q9H7V2 258 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 TRBV5-4A0A0C4DH59 114 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 CDC7O00311 574 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 RNASET2O00584 256 aaKnown RBP3.27□□□□□ -1.89
VPS13C-203ENST00000395896 C8BP07358 591 aa3.27□□□□□ -1.89
VPS13C-203ENST00000395896 EFCAB3Q8N7B9 438 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms