RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 ASPDHA6ND91 283 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 HAUS5O94927 633 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 SLC35G6P0C7Q6 338 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 CXCR5P32302 372 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 GRK3P35626 688 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 TTC27Q6P3X3 843 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 LCTLQ6UWM7 567 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 LANCL3Q6ZV70 420 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 PRSS41Q7RTY9 318 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 STRA8Q7Z7C7 330 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 MRGPRGQ86SM5 289 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 ASPGQ86U10 573 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 C17orf64Q86WR6 236 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 ABHD11Q8NFV4 315 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 GABPB2Q8TAK5 448 aaPredicted RBP16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 SCMH1Q96GD3 660 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 SIGLEC10Q96LC7 697 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 HAUS8Q9BT25 410 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 TRMT6Q9UJA5 497 aaKnown RBP16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 PDE10AQ9Y233 779 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 ZNF835Q9Y2P0 537 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 CSMD2Q7Z408 3487 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 PDZD2O15018 2839 aa16.49■□□□□ 0.23
SNRPA1-202ENST00000394082 A8MUI8 341 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 MAGEB17A8MXT2 336 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 TTI1O43156 1089 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 SLC19A2O60779 497 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 IL1RNP18510 177 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 SKP1P63208 163 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 TUBA3CQ13748 450 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 HERC3Q15034 1050 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 MFSD4BQ5TF39 518 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 CAPN13Q6MZZ7 669 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 TUBA3EQ6PEY2 450 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 AGTRAPQ6RW13 159 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 Q6ZPB1 254 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 PALM2Q8IXS6 379 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 BEST3Q8N1M1 668 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 AGGF1Q8N302 714 aaeCLIP16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 AFAP1L2Q8N4X5 818 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 SLC5A8Q8N695 610 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 HORMAD2Q8N7B1 307 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 NAT8LQ8N9F0 302 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 C2CD4AQ8NCU7 369 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 OR4K1Q8NGD4 311 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 SLC13A3Q8WWT9 602 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 MAGOHBQ96A72 148 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 NAP1L3Q99457 506 aaPredicted RBP16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 LPAR4Q99677 370 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 UTP23Q9BRU9 249 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 CLK4Q9HAZ1 481 aaKnown RBP16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 KCNK13Q9HB14 408 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 ABCF3Q9NUQ8 709 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 TAS2R13Q9NYV9 303 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 ADGRG4Q8IZF6 3080 aa16.48■□□□□ 0.23
SNRPA1-202ENST00000394082 TACC2O95359 2948 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 IGHV3-20A0A0C4DH32 117 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 SGK494L7N484 410 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 LCMT2O60294 686 aaKnown RBP16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 CD46P15529 392 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 NPPBP16860 134 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 COILP38432 576 aaPredicted RBP16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 MPP1Q00013 466 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 TIAL1Q01085 375 aaKnown RBP eCLIP16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 RHAGQ02094 409 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 PWP1Q13610 501 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 NSDHLQ15738 373 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 HSP90AA5PQ58FG0 334 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 GALNT7Q86SF2 657 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 SLC26A11Q86WA9 606 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 PDSS2Q86YH6 399 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 TMEM178AQ8NBL3 297 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 MFSD9Q8NBP5 474 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 KCT2Q8NC54 265 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 EEF1AKMT1Q8WVE0 214 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 PBKQ96KB5 322 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 GPR137Q96N19 417 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 LANCL2Q9NS86 450 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 HCN3Q9P1Z3 774 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 ADAMTS6Q9UKP5 1117 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 MAD1L1Q9Y6D9 718 aa16.47■□□□□ 0.23
SNRPA1-202ENST00000394082 GOLGA8MH3BSY2 632 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 TTC4O95801 387 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 HIST1H2AGP0C0S8 130 aaPredicted RBP16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 HIST1H2ADP20671 130 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 HTR1EP28566 365 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 GRNP28799 593 aaKnown RBP16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 EEF1DP29692 281 aaKnown RBP16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 CD96P40200 585 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 TERF1P54274 439 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 AP1S2P56377 157 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 MEF2AQ02078 507 aaPredicted RBP16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 NAE1Q13564 534 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 ABRAXAS2Q15018 415 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 OR1C1Q15619 314 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 PAPD4Q6PIY7 484 aaKnown RBP16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 CCDC137Q6PK04 289 aaKnown RBP16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 KIAA0408Q6ZU52 694 aa16.46■□□□□ 0.23
SNRPA1-202ENST00000394082 GDF7Q7Z4P5 450 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms