RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 RPS17P08708 135 aaKnown RBP10.77□□□□□ -0.69
CUX1-204ENST00000393824 IL7P13232 177 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 ZNF37AP17032 561 aaPredicted RBP10.77□□□□□ -0.69
CUX1-204ENST00000393824 OGNP20774 298 aaKnown RBP10.77□□□□□ -0.69
CUX1-204ENST00000393824 HTR2BP41595 481 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 AP2S1P53680 142 aaPredicted RBP10.77□□□□□ -0.69
CUX1-204ENST00000393824 SLC10A7Q0GE19 358 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 PON2Q15165 354 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 TBCEQ15813 527 aaPredicted RBP10.77□□□□□ -0.69
CUX1-204ENST00000393824 ARHGAP15Q53QZ3 475 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 TANGO2Q6ICL3 276 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 MRNIPQ6NTE8 343 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 CARNMT1Q8N4J0 409 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 GALNT6Q8NCL4 622 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 FLCNQ8NFG4 579 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 OR5H6Q8NGV6 325 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 OR6P1Q8NGX9 317 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 SLC7A6Q92536 515 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 FGF14Q92915 247 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 MARVELD3Q96A59 401 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 TADA1Q96BN2 335 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 PABPC5Q96DU9 382 aaKnown RBP10.77□□□□□ -0.69
CUX1-204ENST00000393824 ZNF717Q9BY31 904 aaPredicted RBP10.77□□□□□ -0.69
CUX1-204ENST00000393824 PLA2G2FQ9BZM2 168 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 DERL2Q9GZP9 239 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 SEMA4BQ9NPR2 832 aaPredicted RBP10.77□□□□□ -0.69
CUX1-204ENST00000393824 HEBP1Q9NRV9 189 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 VAPAQ9P0L0 249 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 AP3M1Q9Y2T2 418 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 F5P12259 2224 aa10.77□□□□□ -0.69
CUX1-204ENST00000393824 CXCR6O00574 342 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 ZNF197O14709 1029 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 ANKRD28O15084 1053 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 MUSKO15146 869 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 RAMP2O60895 175 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 WBP4O75554 376 aaKnown RBP10.76□□□□□ -0.69
CUX1-204ENST00000393824 FOSL1P15407 271 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 ITGB6P18564 788 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 FMO4P31512 558 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 TIE1P35590 1138 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 KRT20P35900 424 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 RFX2P48378 723 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 TIAL1Q01085 375 aaKnown RBP eCLIP10.76□□□□□ -0.69
CUX1-204ENST00000393824 AAK1Q2M2I8 961 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 LY6G5CQ5SRR4 150 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 LINGO4Q6UY18 593 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 DET1Q7L5Y6 550 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 GALNT5Q7Z7M9 940 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 GLRX5Q86SX6 157 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 ADGRG2Q8IZP9 1017 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 CHCHD4Q8N4Q1 142 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 FNDC5Q8NAU1 212 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 OR10A6Q8NH74 314 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 FAM162AQ96A26 154 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 MAP6Q96JE9 813 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 NEDD4LQ96PU5 975 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 RIBC2Q9H4K1 309 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 ACTL8Q9H568 366 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 DZANK1Q9NVP4 752 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 ZNF225Q9UK10 706 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 U3KQV3 271 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 HELZP42694 1942 aaKnown RBP10.76□□□□□ -0.69
CUX1-204ENST00000393824 A0A0U1RQS6 177 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 A0A1B0GVM2 712 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 A8MV72 311 aaPredicted RBP10.76□□□□□ -0.69
CUX1-204ENST00000393824 KLK8O60259 260 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 CD160O95971 181 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 DDX6P26196 483 aaKnown RBP eCLIP10.76□□□□□ -0.699e-7■■■□□ 16.7
CUX1-204ENST00000393824 CD70P32970 193 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 HNF4AP41235 474 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 MAGEA2P43356 314 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 DAPP51397 102 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 CDH4P55283 916 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 MAXP61244 160 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 SERINC3Q13530 473 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 COL19A1Q14993 1142 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 TIGD6Q17RP2 521 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 GPAT3Q53EU6 434 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 ZNF549Q6P9A3 640 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 Q6ZSR9 355 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 AHSA2Q719I0 299 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 APCDD1Q8J025 514 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 PGBD5Q8N414 524 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 RYBPQ8N488 228 aaPredicted RBP10.76□□□□□ -0.69
CUX1-204ENST00000393824 FBXO39Q8N4B4 442 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 PNPLA1Q8N8W4 532 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 TTC29Q8NA56 475 aaPredicted RBP10.76□□□□□ -0.69
CUX1-204ENST00000393824 CITED4Q96RK1 184 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 AARSD1Q9BTE6 412 aaKnown RBP10.76□□□□□ -0.69
CUX1-204ENST00000393824 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.76□□□□□ -0.692e-10■■■■□ 23.5
CUX1-204ENST00000393824 CHD5Q8TDI0 1954 aa10.76□□□□□ -0.69
CUX1-204ENST00000393824 MIA3Q5JRA6 1907 aa10.75□□□□□ -0.69
CUX1-204ENST00000393824 A0A075B6Q4 140 aa10.75□□□□□ -0.69
CUX1-204ENST00000393824 NEDD8-MDP1E9PL57 170 aa10.75□□□□□ -0.69
CUX1-204ENST00000393824 E9PQ18 207 aa10.75□□□□□ -0.69
CUX1-204ENST00000393824 hCG_2039718K7EN88 272 aa10.75□□□□□ -0.69
CUX1-204ENST00000393824 DFNA5O60443 496 aa10.75□□□□□ -0.69
CUX1-204ENST00000393824 CREG1O75629 220 aa10.75□□□□□ -0.69
CUX1-204ENST00000393824 RECQL5O94762 991 aaPredicted RBP10.75□□□□□ -0.69
CUX1-204ENST00000393824 FGF19O95750 216 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms