RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 HSD3B1P14060 373 aa18.17■□□□□ 0.5
CBX1-202ENST00000393408 HSD3B2P26439 372 aa18.17■□□□□ 0.5
CBX1-202ENST00000393408 EIF2DP41214 584 aaKnown RBP18.17■□□□□ 0.5
CBX1-202ENST00000393408 ASMTP46597 345 aa18.17■□□□□ 0.5
CBX1-202ENST00000393408 TUBA1BP68363 451 aa18.17■□□□□ 0.5
CBX1-202ENST00000393408 SP3Q02447 781 aa18.17■□□□□ 0.5
CBX1-202ENST00000393408 ELP6Q0PNE2 266 aa18.17■□□□□ 0.5
CBX1-202ENST00000393408 TBCEQ15813 527 aaPredicted RBP18.17■□□□□ 0.5
CBX1-202ENST00000393408 EEF1AKMT2Q5JPI9 291 aaKnown RBP18.17■□□□□ 0.5
CBX1-202ENST00000393408 MLIPQ5VWP3 458 aa18.17■□□□□ 0.5
CBX1-202ENST00000393408 DPY19L3Q6ZPD9 716 aa18.17■□□□□ 0.5
CBX1-202ENST00000393408 TUBA1AQ71U36 451 aa18.17■□□□□ 0.5
CBX1-202ENST00000393408 NPAS3Q8IXF0 933 aa18.17■□□□□ 0.5
CBX1-202ENST00000393408 C1orf52Q8N6N3 182 aaKnown RBP18.17■□□□□ 0.5
CBX1-202ENST00000393408 MRPL17Q9NRX2 175 aaKnown RBP18.17■□□□□ 0.5
CBX1-202ENST00000393408 TMEM184CQ9NVA4 438 aa18.17■□□□□ 0.5
CBX1-202ENST00000393408 WDR37Q9Y2I8 494 aa18.17■□□□□ 0.5
CBX1-202ENST00000393408 ZNF451Q9Y4E5 1061 aa18.17■□□□□ 0.5
CBX1-202ENST00000393408 LYVE1Q9Y5Y7 322 aa18.17■□□□□ 0.5
CBX1-202ENST00000393408 SLCO2B1O94956 709 aa18.16■□□□□ 0.5
CBX1-202ENST00000393408 C21orf33P30042 268 aaPredicted RBP18.16■□□□□ 0.5
CBX1-202ENST00000393408 MAGEA10P43363 369 aaPredicted RBP18.16■□□□□ 0.5
CBX1-202ENST00000393408 GSSP48637 474 aa18.16■□□□□ 0.5
CBX1-202ENST00000393408 CLK1P49759 484 aaKnown RBP18.16■□□□□ 0.5
CBX1-202ENST00000393408 DDX59Q5T1V6 619 aaKnown RBP eCLIP18.16■□□□□ 0.5
CBX1-202ENST00000393408 ADNP2Q6IQ32 1131 aa18.16■□□□□ 0.5
CBX1-202ENST00000393408 DSG4Q86SJ6 1040 aa18.16■□□□□ 0.5
CBX1-202ENST00000393408 SLC22A16Q86VW1 577 aa18.16■□□□□ 0.5
CBX1-202ENST00000393408 ASZ1Q8WWH4 475 aa18.16■□□□□ 0.5
CBX1-202ENST00000393408 CLP1Q92989 425 aaKnown RBP18.16■□□□□ 0.5
CBX1-202ENST00000393408 BRF2Q9HAW0 419 aa18.16■□□□□ 0.5
CBX1-202ENST00000393408 ZBTB20Q9HC78 741 aaPredicted RBP18.16■□□□□ 0.5
CBX1-202ENST00000393408 FKBP14Q9NWM8 211 aa18.16■□□□□ 0.5
CBX1-202ENST00000393408 SCHIP1Q9P0W5 487 aaPredicted RBP18.16■□□□□ 0.5
CBX1-202ENST00000393408 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.16■□□□□ 0.5
CBX1-202ENST00000393408 CXorf51AA0A1B0GTR3 108 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 AIREO43918 545 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 ANXA4P09525 319 aaPredicted RBP18.15■□□□□ 0.5
CBX1-202ENST00000393408 IDSP22304 550 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 HNF4AP41235 474 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 SLC19A1P41440 591 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 HKDC1Q2TB90 917 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 ANXA8L1Q5VT79 327 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.15■□□□□ 0.54e-7■■■■□ 23.1
CBX1-202ENST00000393408 CMTM8Q8IZV2 173 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 NAGSQ8N159 534 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 DNAJC22Q8N4W6 341 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 C11orf65Q8NCR3 313 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 VPS37AQ8NEZ2 397 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 PROX1Q92786 737 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 COQ8BQ96D53 544 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 DACH2Q96NX9 599 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 FEVQ99581 238 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 HERC2P3Q9BVR0 1158 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 SGK2Q9HBY8 427 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 POLE4Q9NR33 117 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 NDUFAF4Q9P032 175 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 TESMINQ9Y4I5 508 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 COL4A6Q14031 1691 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 METTL15A6NJ78 407 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 TNFRSF11BO00300 401 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 PSIP1O75475 530 aaKnown RBP18.15■□□□□ 0.5
CBX1-202ENST00000393408 POP4O95707 220 aaKnown RBP18.15■□□□□ 0.5
CBX1-202ENST00000393408 ALDH1A1P00352 501 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 GABRR2P28476 465 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 HLA-FP30511 346 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 SELENOWP63302 87 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 TEAD4Q15561 434 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 MAPK11Q15759 364 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 ZNF404Q494X3 552 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 AGTRAPQ6RW13 159 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 GAREM2Q75VX8 874 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 SCAMP4Q969E2 229 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 MYDGFQ969H8 173 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 OR4K3Q96R72 315 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 CEP44Q9C0F1 390 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 MMP27Q9H306 513 aa18.15■□□□□ 0.5
CBX1-202ENST00000393408 TMEM202A6NGA9 273 aa18.14■□□□□ 0.5
CBX1-202ENST00000393408 PCDH7O60245 1069 aa18.14■□□□□ 0.5
CBX1-202ENST00000393408 SH3BGRLO75368 114 aa18.14■□□□□ 0.5
CBX1-202ENST00000393408 CDK1P06493 297 aa18.14■□□□□ 0.5
CBX1-202ENST00000393408 CTSKP43235 329 aa18.14■□□□□ 0.5
CBX1-202ENST00000393408 SLC7A9P82251 487 aa18.14■□□□□ 0.5
CBX1-202ENST00000393408 PPIGQ13427 754 aaKnown RBP eCLIP18.14■□□□□ 0.5
CBX1-202ENST00000393408 NAE1Q13564 534 aa18.14■□□□□ 0.5
CBX1-202ENST00000393408 LACC1Q8IV20 430 aa18.14■□□□□ 0.5
CBX1-202ENST00000393408 CCDC103Q8IW40 242 aa18.14■□□□□ 0.5
CBX1-202ENST00000393408 SLC5A8Q8N695 610 aa18.14■□□□□ 0.5
CBX1-202ENST00000393408 CHST14Q8NCH0 376 aa18.14■□□□□ 0.5
CBX1-202ENST00000393408 PSMA8Q8TAA3 256 aa18.14■□□□□ 0.5
CBX1-202ENST00000393408 SPPL2AQ8TCT8 520 aa18.14■□□□□ 0.5
CBX1-202ENST00000393408 CHTF18Q8WVB6 975 aa18.14■□□□□ 0.5
CBX1-202ENST00000393408 AUTS2Q8WXX7 1259 aa18.14■□□□□ 0.5
CBX1-202ENST00000393408 STOX2Q9P2F5 926 aaPredicted RBP18.14■□□□□ 0.5
CBX1-202ENST00000393408 MAPRE3Q9UPY8 281 aa18.14■□□□□ 0.5
CBX1-202ENST00000393408 PCDHGA4Q9Y5G9 962 aa18.14■□□□□ 0.5
CBX1-202ENST00000393408 TRIM43BA6NCK2 446 aa18.14■□□□□ 0.49
CBX1-202ENST00000393408 ADAMDEC1O15204 470 aa18.14■□□□□ 0.49
CBX1-202ENST00000393408 AP2A2O94973 939 aa18.14■□□□□ 0.49
CBX1-202ENST00000393408 GADD45AP24522 165 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms