RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 IGKV1-8A0A0C4DH67 115 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 PRAMEF33A0A0G2JMD5 474 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 SPTY2D1-AS1A0A0U1RR47 76 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 GNG14A0A1W2PPG7 69 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 ARPC2O15144 300 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 PTPN6P29350 595 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 HPCAL1P37235 193 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 PLIN5Q00G26 463 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 ZP2Q05996 745 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 ILF3Q12906 894 aaKnown RBP eCLIP10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 OR4F3Q6IEY1 312 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 CYP2R1Q6VVX0 501 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 OR7A2PQ8NGA2 310 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 GPBAR1Q8TDU6 330 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 NELL1Q92832 810 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 MS4A8Q9BY19 250 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 TPSD1Q9BZJ3 242 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 REXO4Q9GZR2 422 aaKnown RBP10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 AHSPQ9NZD4 102 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 EGFL7Q9UHF1 273 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 PCDHB3Q9Y5E6 796 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 PCDHB14Q9Y5E9 798 aa10.98□□□□□ -0.65
SMARCAL1-203ENST00000392128 SCN2BO60939 215 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 CCNDBP1O95273 360 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 TBX6O95947 436 aaPredicted RBP10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 PEBP1P30086 187 aaKnown RBP10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 SLC7A1P30825 629 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 GRIA3P42263 894 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 TRPC1P48995 793 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 WNT3P56703 355 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 CYP4F3Q08477 520 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 MUM1Q2TAK8 710 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 HKDC1Q2TB90 917 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 AASDHQ4L235 1098 aaPredicted RBP10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 KHDRBS2Q5VWX1 349 aaKnown RBP10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 SLC9B2Q86UD5 537 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 AMIGO1Q86WK6 493 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 IFNEQ86WN2 208 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 GJD3Q8N144 294 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 TMEM132CQ8N3T6 1108 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 FRMD1Q8N878 549 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 RLN3Q8WXF3 142 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 PRPF18Q99633 342 aaKnown RBP10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 MRPS30Q9NP92 439 aaKnown RBP10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 MYNNQ9NPC7 610 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 SNRNP200O75643 2136 aaKnown RBP10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 ARHGEF17Q96PE2 2063 aaPredicted RBP10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 TRBC2A0A5B9 178 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 FEZF1A0PJY2 475 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 SAP18O00422 153 aaKnown RBP10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 RFXANKO14593 260 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 THEGLP0DJG4 465 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 HRH2P25021 359 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 SLC19A1P41440 591 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 EIF2B5Q13144 721 aaKnown RBP10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 FZD2Q14332 565 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 DUOXA1Q1HG43 343 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 CMPK2Q5EBM0 449 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 CPTPQ5TA50 214 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 DEPDC1Q5TB30 811 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 DNAJC14Q6Y2X3 702 aaPredicted RBP10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 ANKRD46Q86W74 232 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 PROSER1Q86XN7 944 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 SIX5Q8N196 739 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 FAM160A2Q8N612 972 aaPredicted RBP10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 TTLQ8NG68 377 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 OR2L3Q8NG85 312 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 CDC26Q8NHZ8 85 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 WDR48Q8TAF3 677 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 LCN9Q8WX39 176 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 DNAJC9Q8WXX5 260 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 COQ8BQ96D53 544 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 GBP5Q96PP8 586 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 ECSITQ9BQ95 431 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 INPP5KQ9BT40 448 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 DUSP26Q9BV47 211 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 GSDMCQ9BYG8 508 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 TWSG1Q9GZX9 223 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 PCED1AQ9H1Q7 454 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 VCX3BQ9H321 246 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 SLC6A13Q9NSD5 602 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 TMEM184CQ9NVA4 438 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 ATP6V1HQ9UI12 483 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 KLF15Q9UIH9 416 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 MAGEL2Q9UJ55 1249 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 RIMS3Q9UJD0 308 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 AP4S1Q9Y587 144 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 USP34Q70CQ2 3546 aa10.97□□□□□ -0.65
SMARCAL1-203ENST00000392128 GABRR3A8MPY1 467 aa10.96□□□□□ -0.65
SMARCAL1-203ENST00000392128 KLHL18O94889 574 aa10.96□□□□□ -0.65
SMARCAL1-203ENST00000392128 CHRM5P08912 532 aaPredicted RBP10.96□□□□□ -0.65
SMARCAL1-203ENST00000392128 LAMP1P11279 417 aa10.96□□□□□ -0.65
SMARCAL1-203ENST00000392128 GSTM2P28161 218 aa10.96□□□□□ -0.65
SMARCAL1-203ENST00000392128 RPL3P39023 403 aaKnown RBP10.96□□□□□ -0.65
SMARCAL1-203ENST00000392128 TCEA2Q15560 299 aa10.96□□□□□ -0.65
SMARCAL1-203ENST00000392128 GTDC1Q4AE62 458 aa10.96□□□□□ -0.65
SMARCAL1-203ENST00000392128 IKBIPQ70UQ0 350 aa10.96□□□□□ -0.65
SMARCAL1-203ENST00000392128 SPPL2CQ8IUH8 684 aa10.96□□□□□ -0.65
SMARCAL1-203ENST00000392128 DEFB123Q8N688 67 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms