RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 EIF1ADQ8N9N8 165 aaKnown RBP12.03□□□□□ -0.48
GGPS1-203ENST00000391855 TRPV3Q8NET8 790 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 TTLQ8NG68 377 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 RHEBL1Q8TAI7 183 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 NT5CQ8TCD5 201 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 EHD1Q9H4M9 534 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 SOX17Q9H6I2 414 aaPredicted RBP12.03□□□□□ -0.48
GGPS1-203ENST00000391855 MLXIPLQ9NP71 852 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 SNX15Q9NRS6 342 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 DNAJC11Q9NVH1 559 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 CD274Q9NZQ7 290 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 ZNF180Q9UJW8 692 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 ZNF451Q9Y4E5 1061 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 NCF1BA6NI72 391 aaPredicted RBP12.03□□□□□ -0.48
GGPS1-203ENST00000391855 NCF1CA8MVU1 366 aaPredicted RBP12.03□□□□□ -0.48
GGPS1-203ENST00000391855 MAP2K7O14733 419 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 CLGNO14967 610 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 NDUFS4O43181 175 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 SLC28A2O43868 658 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 LCMT2O60294 686 aaKnown RBP12.03□□□□□ -0.48
GGPS1-203ENST00000391855 H2AFYO75367 372 aaKnown RBP12.03□□□□□ -0.48
GGPS1-203ENST00000391855 STK16O75716 305 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 KRT38O76015 456 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 C2P06681 752 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 NCF1P14598 390 aaPredicted RBP12.03□□□□□ -0.48
GGPS1-203ENST00000391855 IL10P22301 178 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 TYK2P29597 1187 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 MSH2P43246 934 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 CSRP3P50461 194 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 KLC1Q07866 573 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 KLRB1Q12918 225 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 BMPR2Q13873 1038 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 HERC3Q15034 1050 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 TUBB8Q3ZCM7 444 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 CATSPEREQ5SY80 951 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 MROH9Q5TGP6 573 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 ATG9BQ674R7 924 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 ASB18Q6ZVZ8 466 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 ISCA2Q86U28 154 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 KRT78Q8N1N4 520 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 SPATA6LQ8N4H0 392 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 DTWD1Q8N5C7 304 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 AMER3Q8N944 861 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 ISL2Q96A47 359 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 TSNARE1Q96NA8 513 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 ATOH8Q96SQ7 321 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 PAFAH2Q99487 392 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 TMEM79Q9BSE2 394 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 UNKQ9C0B0 810 aaKnown RBP12.03□□□□□ -0.48
GGPS1-203ENST00000391855 ALG9Q9H6U8 611 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 NT5DC2Q9H857 520 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 L2HGDHQ9H9P8 463 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 CLK4Q9HAZ1 481 aaKnown RBP12.03□□□□□ -0.48
GGPS1-203ENST00000391855 ATP13A2Q9NQ11 1180 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 ZNF71Q9NQZ8 489 aaPredicted RBP12.03□□□□□ -0.48
GGPS1-203ENST00000391855 IGSF5Q9NSI5 407 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 GPR83Q9NYM4 423 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 C3orf18Q9UK00 162 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 NFU1Q9UMS0 254 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 HS3ST3B1Q9Y662 390 aa12.03□□□□□ -0.48
GGPS1-203ENST00000391855 NUP210LQ5VU65 1888 aa12.02□□□□□ -0.48
GGPS1-203ENST00000391855 A0A096LPK6 155 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 A0A1W2PQ72 361 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 SOCS6O14544 535 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 SUV39H1O43463 412 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 ALPPP05187 535 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 C1GALT1C1LP0DN25 315 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 PLA2G2AP14555 144 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 ACPPP15309 386 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 HPDP32754 393 aaPredicted RBP12.02□□□□□ -0.49
GGPS1-203ENST00000391855 ATRXP46100 2492 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 EMP2P54851 167 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 MEF2AQ02078 507 aaPredicted RBP12.02□□□□□ -0.49
GGPS1-203ENST00000391855 AIMP2Q13155 320 aaKnown RBP12.02□□□□□ -0.49
GGPS1-203ENST00000391855 COL9A2Q14055 689 aaPredicted RBP12.02□□□□□ -0.49
GGPS1-203ENST00000391855 ACAP2Q15057 778 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 PDK4Q16654 411 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 LGSNQ5TDP6 509 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 VWA5B1Q5TIE3 1220 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 IRAK1BP1Q5VVH5 260 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 SLCO4C1Q6ZQN7 724 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 ABHD13Q7L211 337 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 PRICKLE2Q7Z3G6 844 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 CENPLQ8N0S6 344 aaPredicted RBP12.02□□□□□ -0.49
GGPS1-203ENST00000391855 GALNT16Q8N428 558 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 OR9A4Q8NGU2 314 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 ZCCHC10Q8TBK6 192 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 UBTD2Q8WUN7 234 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 EXT2Q93063 718 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 MRRFQ96E11 262 aaKnown RBP12.02□□□□□ -0.49
GGPS1-203ENST00000391855 EFCAB11Q9BUY7 163 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 YIPF2Q9BWQ6 316 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 C5AR2Q9P296 337 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 COPG2Q9UBF2 871 aa12.02□□□□□ -0.49
GGPS1-203ENST00000391855 PTBP2Q9UKA9 531 aaKnown RBP12.02□□□□□ -0.49
GGPS1-203ENST00000391855 MRPS2Q9Y399 296 aaKnown RBP12.02□□□□□ -0.49
GGPS1-203ENST00000391855 ATMQ13315 3056 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 EXOC1LA0A1B0GW35 172 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 HMX2A2RU54 273 aa12.01□□□□□ -0.49
GGPS1-203ENST00000391855 IDSB3KWA1 339 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms