RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 MEMO1Q9Y316 297 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 CDC7O00311 574 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 NRP1O14786 923 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 INCA1Q0VD86 236 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 CAMK1Q14012 370 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 KIAA1161Q6NSJ0 714 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 PIM3Q86V86 326 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 OR7D4Q8NG98 312 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 RFT1Q96AA3 541 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 RNF31Q96EP0 1072 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 MTERF1Q99551 399 aaKnown RBP19.11■□□□□ 0.65
SHANK1-203ENST00000391813 SLC29A1Q99808 456 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 EQTNQ9NQ60 294 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 ZNF69Q9UC07 566 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 PLCH1Q4KWH8 1693 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 KIAA0513O60268 411 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 ELFN1P0C7U0 828 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 SLC35E2BP0CK96 405 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 NKX2-5P52952 324 aaPredicted RBP19.11■□□□□ 0.65
SHANK1-203ENST00000391813 CBX2Q14781 532 aaPredicted RBP19.11■□□□□ 0.65
SHANK1-203ENST00000391813 PTGR1Q14914 329 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 ALG11Q2TAA5 492 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 SPIN4Q56A73 249 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 DHRS4Q9BTZ2 278 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 NUDT15Q9NV35 164 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 HPF1Q9NWY4 346 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 MS4A12Q9NXJ0 267 aa19.11■□□□□ 0.65
SHANK1-203ENST00000391813 MYBPHLA2RUH7 354 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 KELP23276 732 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 EDNRBP24530 442 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 AP2S1P53680 142 aaPredicted RBP19.1■□□□□ 0.65
SHANK1-203ENST00000391813 DSG2Q14126 1118 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 CFAP206Q8IYR0 622 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 OR6K2Q8NGY2 324 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 HHIPL1Q96JK4 782 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 PKD1L3Q7Z443 1732 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 MANBAO00462 879 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 CHP2O43745 196 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 RP2O75695 350 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 STC1P52823 247 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 NCS1P62166 190 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 ADGRG2Q8IZP9 1017 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 OR10T2Q8NGX3 314 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 SETD6Q8TBK2 473 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 CHPT1Q8WUD6 406 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 SUSD3Q96L08 255 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 GIMAP2Q9UG22 337 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 EVLQ9UI08 416 aaPredicted RBP19.1■□□□□ 0.65
SHANK1-203ENST00000391813 ENPP5Q9UJA9 477 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 HSPB3Q12988 150 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 CYBRD1Q53TN4 286 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 Q8N402 240 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 GPR152Q8TDT2 470 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 SCRN2Q96FV2 425 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 ZSWIM3Q96MP5 696 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 EFCAB11Q9BUY7 163 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 MIR1-1HGQ9H1L0 117 aa19.1■□□□□ 0.65
SHANK1-203ENST00000391813 ELL3Q9HB65 397 aaPredicted RBP19.1■□□□□ 0.65
SHANK1-203ENST00000391813 TLX2O43763 284 aaPredicted RBP19.09■□□□□ 0.65
SHANK1-203ENST00000391813 OPN1SWP03999 348 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 DGKGP49619 791 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 KCNC4Q03721 635 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 SIRPB2Q5JXA9 342 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 PRAMEF17Q5VTA0 474 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 IFNLR1Q8IU57 520 aaPredicted RBP19.09■□□□□ 0.65
SHANK1-203ENST00000391813 TOR1AIP2Q8NFQ8 470 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 KCNA7Q96RP8 456 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 CERS4Q9HA82 394 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 PCDHGA7Q9Y5G6 932 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 RLN2P04090 185 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 F7P08709 466 aaPredicted RBP19.09■□□□□ 0.65
SHANK1-203ENST00000391813 CORO1AP31146 461 aaKnown RBP19.09■□□□□ 0.65
SHANK1-203ENST00000391813 CBX5P45973 191 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 NPRL3Q12980 569 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 TNFAIP8L2Q6P589 184 aaPredicted RBP19.09■□□□□ 0.65
SHANK1-203ENST00000391813 CLEC20AQ6ZU45 233 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 GOLGA7Q7Z5G4 137 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 RTP4Q96DX8 246 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 BHLHE41Q9C0J9 482 aaPredicted RBP19.09■□□□□ 0.65
SHANK1-203ENST00000391813 ELAC1Q9H777 363 aaKnown RBP19.09■□□□□ 0.65
SHANK1-203ENST00000391813 GTPBP1O00178 669 aaKnown RBP19.09■□□□□ 0.65
SHANK1-203ENST00000391813 WNT9AO14904 365 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 RAB36O95755 333 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 KCNE1P15382 129 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 CDKL1Q00532 357 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 SAMD14Q8IZD0 417 aaPredicted RBP19.09■□□□□ 0.65
SHANK1-203ENST00000391813 PLD4Q96BZ4 506 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 NDC1Q9BTX1 674 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 ZNF639Q9UID6 485 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 RIMS3Q9UJD0 308 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 CLCA3PQ9Y6N3 262 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 NUP188Q5SRE5 1749 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 PRKACBP22694 351 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 TM4SF4P48230 202 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 TAS2R43P59537 309 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 EIPR1Q53HC9 387 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 HAGHLQ6PII5 290 aaPredicted RBP19.09■□□□□ 0.65
SHANK1-203ENST00000391813 ARL9Q6T311 187 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 ZNF615Q8N8J6 731 aa19.09■□□□□ 0.65
SHANK1-203ENST00000391813 GDPD1Q8N9F7 314 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms