RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 DUSP5Q16690 384 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 FAM106AQ4KMX7 169 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 DET1Q7L5Y6 550 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 ADCK1Q86TW2 530 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 SLC22A15Q8IZD6 547 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 RYBPQ8N488 228 aaPredicted RBP2.49□□□□□ -2.01
TRAV40-201ENST00000390467 Q8N7P7 452 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 GBP7Q8N8V2 638 aaPredicted RBP2.49□□□□□ -2.01
TRAV40-201ENST00000390467 OR4C15Q8NGM1 316 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 OR4Q3Q8NH05 313 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 SECISBP2LQ93073 1101 aaKnown RBP2.49□□□□□ -2.01
TRAV40-201ENST00000390467 C11orf52Q96A22 123 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 RFT1Q96AA3 541 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 UBAC1Q9BSL1 405 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 APOL6Q9BWW8 343 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 TXNDC16Q9P2K2 825 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 B4GALT7Q9UBV7 327 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 RPS6KA6Q9UK32 745 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 PILRBQ9UKJ0 227 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 PILRAQ9UKJ1 303 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 VSIG4Q9Y279 399 aa2.49□□□□□ -2.01
TRAV40-201ENST00000390467 TCRBV21S2A2A0A5A6 115 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 C17orf105B2RV13 164 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 ZNF749O43361 778 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 TADA2AO75478 443 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 GFPT2O94808 682 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 RENP00797 406 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 C4BPBP20851 252 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 GSK3BP49841 420 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 DLK1P80370 383 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 ACSM1Q08AH1 577 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 RALGDSQ12967 914 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 PTGISQ16647 500 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 LACTB2Q53H82 288 aaPredicted RBP2.48□□□□□ -2.01
TRAV40-201ENST00000390467 BAIAP2L2Q6UXY1 529 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 KRTAP5-2Q701N4 177 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 CARM1Q86X55 608 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 C11orf42Q8N5U0 333 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 CSNK1G2-AS1Q8NCQ2 148 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 OR9Q2Q8NGE9 314 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 RHOXF1Q8NHV9 184 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 CNOT6LQ96LI5 555 aaKnown RBP2.48□□□□□ -2.01
TRAV40-201ENST00000390467 SDCBP2Q9H190 292 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 ACTL8Q9H568 366 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 IL1RAPQ9NPH3 570 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 PIH1D3Q9NQM4 214 aaKnown RBP2.48□□□□□ -2.01
TRAV40-201ENST00000390467 NSMCE4AQ9NXX6 385 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 ZNF581Q9P0T4 197 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 FAM169AQ9Y6X4 670 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 KIF25-AS1Q9Y6Z4 181 aa2.48□□□□□ -2.01
TRAV40-201ENST00000390467 UMODL1Q5DID0 1318 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 IGHV3-16A0A0C4DH30 117 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 TRBC2A0A5B9 178 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 K7EQG2 157 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 MAGEB2O15479 319 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 LMO2P25791 158 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 PKLRP30613 574 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 GPR183P32249 361 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 NNMTP40261 264 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 CETN2P41208 172 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 EIF5P55010 431 aaKnown RBP2.47□□□□□ -2.01
TRAV40-201ENST00000390467 POU5F1Q01860 360 aaKnown RBP2.47□□□□□ -2.01
TRAV40-201ENST00000390467 ILF2Q12905 390 aaKnown RBP2.47□□□□□ -2.01
TRAV40-201ENST00000390467 ITPK1Q13572 414 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 ALCAMQ13740 583 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 PRR30Q53SZ7 412 aaPredicted RBP2.47□□□□□ -2.01
TRAV40-201ENST00000390467 C9orf66Q5T8R8 295 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 LEMD1Q68G75 181 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 ANKRD33Q7Z3H0 272 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 C5orf24Q7Z6I8 188 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 IQCHQ86VS3 1027 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 CATSPER3Q86XQ3 398 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 CCDC60Q8IWA6 550 aaPredicted RBP2.47□□□□□ -2.01
TRAV40-201ENST00000390467 ZBED8Q8IZ13 594 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 C4orf32Q8N8J7 132 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 PHPT1Q9NRX4 125 aaPredicted RBP2.47□□□□□ -2.01
TRAV40-201ENST00000390467 TBC1D7Q9P0N9 293 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 IL36AQ9UHA7 158 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 PLCL2Q9UPR0 1127 aa2.47□□□□□ -2.01
TRAV40-201ENST00000390467 MRPS18CQ9Y3D5 142 aaKnown RBP2.47□□□□□ -2.01
TRAV40-201ENST00000390467 TRIM49BA6NDI0 452 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 F8VVB4 439 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 F8VWA3 439 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 THY1P04216 161 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 OR52Z1P0C646 297 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 LIMK1P53667 647 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 CSE1LP55060 971 aaKnown RBP2.46□□□□□ -2.02
TRAV40-201ENST00000390467 ABCE1P61221 599 aaKnown RBP2.46□□□□□ -2.02
TRAV40-201ENST00000390467 ERVK-16P61578 105 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 BTG1P62324 171 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 SRPXP78539 464 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 HYIQ5T013 277 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 AGAP7PQ5VUJ5 663 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 SPATA1Q5VX52 437 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 PLPPR4Q7Z2D5 763 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 TLK2Q86UE8 772 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 ZC3H3Q8IXZ2 948 aaKnown RBP2.46□□□□□ -2.02
TRAV40-201ENST00000390467 AVL9Q8NBF6 648 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 MRAPQ8TCY5 172 aa2.46□□□□□ -2.02
TRAV40-201ENST00000390467 UBE2Q2Q8WVN8 375 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms