RNA–Protein interactions for RNA: ENST00000384165.1

RNU6-42P-201, Transcript of RNA, U6 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU6-42P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-42P-201ENST00000384165 WDR54Q9H977 334 aa0.84□□□□□ -2.27
RNU6-42P-201ENST00000384165 FGF22Q9HCT0 170 aa0.84□□□□□ -2.27
RNU6-42P-201ENST00000384165 TBC1D22BQ9NU19 505 aa0.84□□□□□ -2.27
RNU6-42P-201ENST00000384165 TRMT1Q9NXH9 659 aaKnown RBP0.84□□□□□ -2.27
RNU6-42P-201ENST00000384165 FAM53CQ9NYF3 392 aa0.84□□□□□ -2.27
RNU6-42P-201ENST00000384165 CACNG5Q9UF02 275 aa0.84□□□□□ -2.27
RNU6-42P-201ENST00000384165 EPHA6Q9UF33 1036 aa0.84□□□□□ -2.27
RNU6-42P-201ENST00000384165 APLNQ9ULZ1 77 aa0.84□□□□□ -2.27
RNU6-42P-201ENST00000384165 ICAM5Q9UMF0 924 aa0.84□□□□□ -2.27
RNU6-42P-201ENST00000384165 ZNF175Q9Y473 711 aa0.84□□□□□ -2.27
RNU6-42P-201ENST00000384165 PCDHA3Q9Y5H8 950 aa0.84□□□□□ -2.27
RNU6-42P-201ENST00000384165 SCINQ9Y6U3 715 aa0.84□□□□□ -2.27
RNU6-42P-201ENST00000384165 FAM169AQ9Y6X4 670 aa0.84□□□□□ -2.27
RNU6-42P-201ENST00000384165 C15orf38-AP3S2A0A0A6YYH1 394 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 GOLGA6L7A0A1B0GV03 622 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 FAM170AA1A519 330 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 LILRA5A6NI73 299 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 OR5K4A6NMS3 321 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 SEC14L6B5MCN3 397 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 E7EQL1 145 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 TEX33O43247 280 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 XPOTO43592 962 aaKnown RBP0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 SNX2O60749 519 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 CNOT3O75175 753 aaKnown RBP0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 STC2O76061 302 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 SEC24DO94855 1032 aaPredicted RBP0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 NDUFB8O95169 186 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 MBD4O95243 580 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 CNIH1O95406 144 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 VIPP01282 170 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 ZSCAN22P10073 491 aaPredicted RBP0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 IDEP14735 1019 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 ST6GAL1P15907 406 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 PDGFRAP16234 1089 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 SDSP20132 328 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 VAMP1P23763 118 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 PTPN3P26045 913 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 HOXD9P28356 352 aaPredicted RBP0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 CORO1AP31146 461 aaKnown RBP0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 FOXN2P32314 431 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 UBA7P41226 1012 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 TXKP42681 527 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 MT4P47944 62 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 LUMP51884 338 aaPredicted RBP0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 GEMIN4P57678 1058 aaKnown RBP0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 CLRN1P58418 232 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 TAS2R50P59544 299 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 BPIFB3P59826 476 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 ZNF445P59923 1031 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 GPR85P60893 370 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 OSTNP61366 133 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 LMO4P61968 165 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 SNRPD2P62316 118 aaKnown RBP0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 TRA2BP62995 288 aaKnown RBP0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 MT1HP80294 61 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 IRF9Q00978 393 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 SULT2A1Q06520 285 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 BSPH1Q075Z2 132 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 STRN3Q13033 797 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 MTM1Q13496 603 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 RIN1Q13671 783 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 DOC2AQ14183 400 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 GRM3Q14832 879 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 WDR43Q15061 677 aaKnown RBP eCLIP0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 IRF4Q15306 451 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 TTF1Q15361 905 aaPredicted RBP0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 DLG2Q15700 870 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 NKG7Q16617 165 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 SRSF7Q16629 238 aaKnown RBP eCLIP0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 CYP1B1Q16678 543 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 SLC5A12Q1EHB4 618 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 HFEQ30201 348 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 CCDC184Q52MB2 194 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 XKR6Q5GH73 641 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 FIGNQ5HY92 759 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 DNTTIP2Q5QJE6 756 aaKnown RBP0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 C10orf120Q5SQS8 335 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 DCST1Q5T197 706 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 SNX30Q5VWJ9 437 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 IL23RQ5VWK5 629 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 WSCD1Q658N2 575 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 KCTD16Q68DU8 428 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 GPR139Q6DWJ6 353 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 ARMC6Q6NXE6 501 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 H3F3CQ6NXT2 135 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 IYDQ6PHW0 289 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 SLC25A47Q6Q0C1 308 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 BLOC1S3Q6QNY0 202 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 ZNF474Q6S9Z5 364 aaPredicted RBP0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 KDELC1Q6UW63 502 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 Q6ZNB5 142 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 Q6ZRM9 215 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 BEND4Q6ZU67 534 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 CCDC121Q6ZUS5 278 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 LARP4Q71RC2 724 aaKnown RBP eCLIP0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 DPH6Q7L8W6 267 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 PIGWQ7Z7B1 504 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 TADA2BQ86TJ2 420 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 TMEM110Q86TL2 294 aa0.83□□□□□ -2.28
RNU6-42P-201ENST00000384165 IGFN1Q86VF2 1251 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms