RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 PDAP1Q13442 181 aaKnown RBP13.37□□□□□ -0.27
SHOX-202ENST00000381575 BTBD16Q32M84 506 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 SPANXN3Q5MJ09 141 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 UGT3A1Q6NUS8 523 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 ASPGQ86U10 573 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 FJX1Q86VR8 437 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 KLHL7Q8IXQ5 586 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 BCORP1Q8N888 145 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 OR5T3Q8NGG3 340 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 METTL21AQ8WXB1 218 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 CERS2Q96G23 380 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 IMMP1LQ96LU5 166 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 CYTH2Q99418 400 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 OLFM1Q99784 485 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 TRIM51Q9BSJ1 452 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 SGPP1Q9BX95 441 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 SPNS1Q9H2V7 528 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 ARL15Q9NXU5 204 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 NAALAD2Q9Y3Q0 740 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 DCHS2Q6V1P9 2916 aa13.37□□□□□ -0.27
SHOX-202ENST00000381575 CACNA1CQ13936 2221 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 TRAV17A0A0B4J275 112 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 CTAGE15A4D2H0 777 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 USP27XA6NNY8 438 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 H0YIG0 161 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 DNAJB6O75190 326 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 WISP2O76076 250 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 TTC4O95801 387 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 GUCA1CO95843 209 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 SERPIND1P05546 499 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 NPPBP16860 134 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 FDXRP22570 491 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 IVDP26440 423 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 ELK3P41970 407 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 TDGF1P3P51864 188 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 OLR1P78380 273 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 SP140Q13342 867 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 TEDDM1Q5T9Z0 273 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 HECTD2Q5U5R9 776 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 ABHD17BQ5VST6 288 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 CAPN13Q6MZZ7 669 aaPredicted RBP13.36□□□□□ -0.27
SHOX-202ENST00000381575 LCTLQ6UWM7 567 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 RIPOR1Q6ZS17 1223 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 CPEB2Q7Z5Q1 589 aaKnown RBP13.36□□□□□ -0.27
SHOX-202ENST00000381575 ANKRD37Q7Z713 158 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 CTAGE6Q86UF2 777 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 CNTN4Q8IWV2 1026 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 CAMKVQ8NCB2 501 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 ZNF740Q8NDX6 193 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 SLC13A3Q8WWT9 602 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 HAS2Q92819 552 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 TSLPQ969D9 159 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 TM4SF19Q96DZ7 209 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 PEX11GQ96HA9 241 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 TSNARE1Q96NA8 513 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 OR4K3Q96R72 315 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 TUBB6Q9BUF5 446 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 PCBD2Q9H0N5 130 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 ANKHQ9HCJ1 492 aa13.36□□□□□ -0.27
SHOX-202ENST00000381575 TACC2O95359 2948 aa13.35□□□□□ -0.27
SHOX-202ENST00000381575 KCNE1BA0A087WTH5 132 aa13.35□□□□□ -0.27
SHOX-202ENST00000381575 NDUFS4O43181 175 aa13.35□□□□□ -0.27
SHOX-202ENST00000381575 OR1F1O43749 312 aa13.35□□□□□ -0.27
SHOX-202ENST00000381575 MAN1A2O60476 641 aa13.35□□□□□ -0.27
SHOX-202ENST00000381575 SAT1P21673 171 aa13.35□□□□□ -0.27
SHOX-202ENST00000381575 HRH2P25021 359 aa13.35□□□□□ -0.27
SHOX-202ENST00000381575 ZNF460Q14592 562 aa13.35□□□□□ -0.27
SHOX-202ENST00000381575 CATSPEREQ5SY80 951 aa13.35□□□□□ -0.27
SHOX-202ENST00000381575 ZNF324BQ6AW86 544 aaPredicted RBP13.35□□□□□ -0.27
SHOX-202ENST00000381575 LRRC8EQ6NSJ5 796 aa13.35□□□□□ -0.27
SHOX-202ENST00000381575 RPUSD3Q6P087 351 aaKnown RBP13.35□□□□□ -0.27
SHOX-202ENST00000381575 ANKMY2Q8IV38 441 aa13.35□□□□□ -0.27
SHOX-202ENST00000381575 MFSD9Q8NBP5 474 aa13.35□□□□□ -0.27
SHOX-202ENST00000381575 NR4A3Q92570 626 aa13.35□□□□□ -0.27
SHOX-202ENST00000381575 ANKRD10Q9NXR5 420 aa13.35□□□□□ -0.27
SHOX-202ENST00000381575 PSAT1Q9Y617 370 aa13.35□□□□□ -0.27
SHOX-202ENST00000381575 TEP1Q99973 2627 aaKnown RBP13.35□□□□□ -0.27
SHOX-202ENST00000381575 SLC16A5O15375 505 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 HIST1H2AGP0C0S8 130 aaPredicted RBP13.34□□□□□ -0.27
SHOX-202ENST00000381575 SLC35G6P0C7Q6 338 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 HIST1H2ADP20671 130 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 MST1P26927 711 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 GRK3P35626 688 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 IL2P60568 153 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 ABRAXAS2Q15018 415 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 SFT2D3Q587I9 215 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 TMEM207Q6UWW9 146 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 GFRALQ6UXV0 394 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 KIAA0408Q6ZU52 694 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 BEST3Q8N1M1 668 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 THAP11Q96EK4 314 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 SNF8Q96H20 258 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 HIST1H2AHQ96KK5 128 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 NPAS2Q99743 824 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 HIST1H2AJQ99878 128 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 H2AFJQ9BTM1 129 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 HES7Q9BYE0 225 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 TRIM31Q9BZY9 425 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 LANCL2Q9NS86 450 aa13.34□□□□□ -0.27
SHOX-202ENST00000381575 STMN3Q9NZ72 180 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms