RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 DPH2Q9BQC3 489 aaPredicted RBP8.81□□□□□ -1
HMGN1-202ENST00000380747 NLNQ9BYT8 704 aa8.81□□□□□ -1
HMGN1-202ENST00000380747 TRIM4Q9C037 500 aa8.81□□□□□ -1
HMGN1-202ENST00000380747 SYNPO2LQ9H987 977 aa8.81□□□□□ -1
HMGN1-202ENST00000380747 IGSF5Q9NSI5 407 aa8.81□□□□□ -1
HMGN1-202ENST00000380747 IFT80Q9P2H3 777 aaPredicted RBP8.81□□□□□ -1
HMGN1-202ENST00000380747 EGFL7Q9UHF1 273 aa8.81□□□□□ -1
HMGN1-202ENST00000380747 RUVBL1Q9Y265 456 aaKnown RBP8.81□□□□□ -1
HMGN1-202ENST00000380747 SLC22A14Q9Y267 594 aa8.81□□□□□ -1
HMGN1-202ENST00000380747 PCDHGA6Q9Y5G7 932 aa8.81□□□□□ -1
HMGN1-202ENST00000380747 ITPR2Q14571 2701 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 A0A1B0GX78 115 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 FITM1A5D6W6 292 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 CLEC18AA5D8T8 446 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 SUPT3HB4E1H0 165 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 TRIM49D1C9J1S8 452 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 UBXN8O00124 270 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 TXNDC9O14530 226 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 DSCR3O14972 297 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 TAPBPO15533 448 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 ICMTO60725 284 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 KERAO60938 352 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 SUPT3HO75486 399 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 MED26O95402 600 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 ALDOAP04075 364 aaKnown RBP8.8□□□□□ -1
HMGN1-202ENST00000380747 CAPN1P07384 714 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 RAB40ALP0C0E4 278 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 PIM1P11309 404 aaPredicted RBP8.8□□□□□ -1
HMGN1-202ENST00000380747 GP1BBP13224 206 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 CNTFP26441 200 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 SLC26A3P40879 764 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 GDF5P43026 501 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 OR1D4P47884 311 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 GLRBP48167 497 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 KCNC1P48547 511 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 HSPA7P48741 367 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 SMCPP49901 116 aaPredicted RBP8.8□□□□□ -1
HMGN1-202ENST00000380747 RPS15AP62244 130 aaKnown RBP8.8□□□□□ -1
HMGN1-202ENST00000380747 NFKB2Q00653 900 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 MEF2AQ02078 507 aaPredicted RBP8.8□□□□□ -1
HMGN1-202ENST00000380747 RELAQ04206 551 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 SLC29A2Q14542 456 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 TBR1Q16650 682 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 FAM83EQ2M2I3 478 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 MUM1Q2TAK8 710 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 HKDC1Q2TB90 917 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 PRTGQ2VWP7 1150 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 DEFB109BQ30KR1 87 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 NKAIN1Q4KMZ8 207 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 LGSNQ5TDP6 509 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 YOD1Q5VVQ6 348 aaPredicted RBP8.8□□□□□ -1
HMGN1-202ENST00000380747 SULT1C3Q6IMI6 304 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 KLC3Q6P597 504 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 FAM198BQ6UWH4 519 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 CLEC18BQ6UXF7 455 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 ZNF517Q6ZMY9 492 aaPredicted RBP8.8□□□□□ -1
HMGN1-202ENST00000380747 TRIM46Q7Z4K8 759 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 CCDC91Q7Z6B0 441 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 TMPRSS11BQ86T26 416 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 SYVN1Q86TM6 617 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 ISCA2Q86U28 154 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 CENPLQ8N0S6 344 aaPredicted RBP8.8□□□□□ -1
HMGN1-202ENST00000380747 TBC1D19Q8N5T2 526 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 SNX31Q8N9S9 440 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 CLEC18CQ8NCF0 446 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 ABHD11Q8NFV4 315 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 UBLCP1Q8WVY7 318 aaPredicted RBP8.8□□□□□ -1
HMGN1-202ENST00000380747 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.8□□□□□ -1
HMGN1-202ENST00000380747 EXTL1Q92935 676 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 NEIL2Q969S2 332 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 ESAMQ96AP7 390 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 RHBDF1Q96CC6 855 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 C10orf90Q96M02 699 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 MACROD1Q9BQ69 325 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 TMEM79Q9BSE2 394 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 TXLNGYQ9BZA5 131 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 ANKZF1Q9H8Y5 726 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 CNOT10Q9H9A5 744 aaKnown RBP8.8□□□□□ -1
HMGN1-202ENST00000380747 NUDT4Q9NZJ9 180 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.8□□□□□ -1
HMGN1-202ENST00000380747 ZNF180Q9UJW8 692 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 PADI2Q9Y2J8 665 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 KCNE2Q9Y6J6 123 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 MAU2Q9Y6X3 613 aa8.8□□□□□ -1
HMGN1-202ENST00000380747 V9GYY5 206 aaPredicted RBP8.8□□□□□ -1
HMGN1-202ENST00000380747 P2RX6O15547 441 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 OR1F1O43749 312 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 LCMT2O60294 686 aaKnown RBP8.79□□□□□ -1
HMGN1-202ENST00000380747 CCNT2O60583 730 aaKnown RBP8.79□□□□□ -1
HMGN1-202ENST00000380747 H2AFYO75367 372 aaKnown RBP8.79□□□□□ -1
HMGN1-202ENST00000380747 STK16O75716 305 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 KLHL2O95198 593 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 SERPIND1P05546 499 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 SNRPAP09012 282 aaKnown RBP8.79□□□□□ -1
HMGN1-202ENST00000380747 FBLP22087 321 aaKnown RBP8.79□□□□□ -1
HMGN1-202ENST00000380747 TNFRSF8P28908 595 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 BCL6P41182 706 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 FOLR3P41439 243 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 SLC6A12P48065 614 aa8.79□□□□□ -1
HMGN1-202ENST00000380747 CDC16Q13042 620 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms