RNA–Protein interactions for RNA: ENST00000380445.7

VPS16-202, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS16, Length 2,750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-202ENST00000380445 LAMP1P11279 417 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 CDH2P19022 906 aaPredicted RBP12.15□□□□□ -0.46
VPS16-202ENST00000380445 GJA4P35212 333 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 CNTN1Q12860 1018 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 NFE2L1Q14494 772 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 NKG7Q16617 165 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 TANGO2Q6ICL3 276 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 CES5AQ6NT32 575 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 TMEM53Q6P2H8 277 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 PNCKQ6P2M8 343 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 NXPE4Q6UWF7 544 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 R3HCC1LQ7Z5L2 792 aaKnown RBP12.15□□□□□ -0.46
VPS16-202ENST00000380445 HIPK1Q86Z02 1210 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 COQ8BQ96D53 544 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 OSBPL10Q9BXB5 764 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 TSC22D4Q9Y3Q8 395 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 CEPT1Q9Y6K0 416 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 AP1M2Q9Y6Q5 423 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 PIPSLA2A3N6 862 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 H3BSA7 217 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 B3GALT4O96024 378 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 FCARP24071 287 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 HSD17B2P37059 387 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 PIK3CBP42338 1070 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 ARHGDIAP52565 204 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 ZNF763Q0D2J5 394 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 VEZF1Q14119 521 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 HKDC1Q2TB90 917 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 RFX4Q33E94 735 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 CATSPEREQ5SY80 951 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 CCNYL2Q5T2Q4 361 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 KLHL35Q6PF15 583 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 VITQ6UXI7 678 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 C11orf96Q7Z7L8 435 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 PDZD3Q86UT5 571 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 LRRTM4Q86VH4 590 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 DCUN1D3Q8IWE4 304 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 LRRC56Q8IYG6 542 aaPredicted RBP12.15□□□□□ -0.46
VPS16-202ENST00000380445 C10orf111Q8N326 155 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 ZNF555Q8NEP9 628 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 GPR156Q8NFN8 814 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 PNPT1Q8TCS8 783 aaKnown RBP12.15□□□□□ -0.46
VPS16-202ENST00000380445 HSPBAP1Q96EW2 488 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 ZDHHC5Q9C0B5 715 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 BHLHE41Q9C0J9 482 aaPredicted RBP12.15□□□□□ -0.46
VPS16-202ENST00000380445 OR52A5Q9H2C5 316 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 TPT1P8Q9HAU6 139 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 FAIMQ9NVQ4 179 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 IFT80Q9P2H3 777 aaPredicted RBP12.15□□□□□ -0.46
VPS16-202ENST00000380445 ZNF282Q9UDV7 671 aaPredicted RBP12.15□□□□□ -0.46
VPS16-202ENST00000380445 RSL24D1Q9UHA3 163 aaKnown RBP12.15□□□□□ -0.46
VPS16-202ENST00000380445 C3orf18Q9UK00 162 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 CDH7Q9ULB5 785 aa12.15□□□□□ -0.46
VPS16-202ENST00000380445 RNASET2O00584 256 aaKnown RBP12.14□□□□□ -0.47
VPS16-202ENST00000380445 KCNK5O95279 499 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 CLIC3O95833 236 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 IDSP22304 550 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 MAGEA2P43356 314 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 CAMK2GQ13555 558 aaPredicted RBP12.14□□□□□ -0.47
VPS16-202ENST00000380445 PIP5KL1Q5T9C9 394 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 LCTLQ6UWM7 567 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 SFTPA1Q8IWL2 248 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 OFCC1Q8IZS5 231 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 KRT78Q8N1N4 520 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 FNDC8Q8TC99 324 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 SH3KBP1Q96B97 665 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 TBC1D20Q96BZ9 403 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 ASPSCR1Q9BZE9 553 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 DMRT3Q9NQL9 472 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 SH3BP4Q9P0V3 963 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 ATP6V1HQ9UI12 483 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 BAG5Q9UL15 447 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 VPS4AQ9UN37 437 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 ORC6Q9Y5N6 252 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 C2orf16Q68DN1 1984 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 KIAA1549LQ6ZVL6 1849 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 GPR89AB7ZAQ6 455 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 APODP05090 189 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 GPR89BP0CG08 455 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 TTKP33981 857 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 CDH15P55291 814 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 PPP2R2BQ00005 443 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 ARHGAP19Q14CB8 494 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 FAM109BQ6ICB4 259 aaPredicted RBP12.14□□□□□ -0.47
VPS16-202ENST00000380445 HEATR4Q86WZ0 1026 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 ZDHHC21Q8IVQ6 265 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 CLECL1Q8IZS7 167 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 ING2Q9H160 280 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 REEP4Q9H6H4 257 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 CERS4Q9HA82 394 aa12.14□□□□□ -0.47
VPS16-202ENST00000380445 ZNF682O95780 498 aa12.13□□□□□ -0.47
VPS16-202ENST00000380445 KDELR2P33947 212 aa12.13□□□□□ -0.47
VPS16-202ENST00000380445 RAD23AP54725 363 aa12.13□□□□□ -0.47
VPS16-202ENST00000380445 CDK3Q00526 305 aa12.13□□□□□ -0.47
VPS16-202ENST00000380445 SLC14A1Q13336 389 aa12.13□□□□□ -0.47
VPS16-202ENST00000380445 SF1Q15637 639 aaKnown RBP12.13□□□□□ -0.47
VPS16-202ENST00000380445 CYP2A13Q16696 494 aa12.13□□□□□ -0.47
VPS16-202ENST00000380445 ZIK1Q3SY52 487 aaPredicted RBP12.13□□□□□ -0.47
VPS16-202ENST00000380445 PRAMEF14Q5SWL7 426 aa12.13□□□□□ -0.47
VPS16-202ENST00000380445 PRAMEF13Q5VWM6 474 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms