RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 ALBP02768 609 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 RPS21P63220 83 aaKnown RBP22.22■■□□□ 1.15
VPS16-201ENST00000380443 ADARB1P78563 741 aaKnown RBP22.22■■□□□ 1.15
VPS16-201ENST00000380443 TSTA3Q13630 321 aaPredicted RBP22.22■■□□□ 1.15
VPS16-201ENST00000380443 KIAA1161Q6NSJ0 714 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 ABRAXAS1Q6UWZ7 409 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 USP51Q70EK9 711 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 IKBIPQ70UQ0 350 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 GOT1L1Q8NHS2 421 aaPredicted RBP22.22■■□□□ 1.15
VPS16-201ENST00000380443 CYGBQ8WWM9 190 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 FAM131CQ96AQ9 280 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 C1QTNF7Q9BXJ2 289 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 NT5DC2Q9H857 520 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 CAAP1Q9H8G2 361 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 SUFUQ9UMX1 484 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 VPS4AQ9UN37 437 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 GNGT2O14610 69 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 KCNK5O95279 499 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 MT-ND1P03886 318 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 MYCLP1P12525 358 aaPredicted RBP22.22■■□□□ 1.15
VPS16-201ENST00000380443 MAGEA2P43356 314 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 CNPY1Q3B7I2 92 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 PYCR3Q53H96 274 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 TTC33Q6PID6 262 aaPredicted RBP22.22■■□□□ 1.15
VPS16-201ENST00000380443 PARM1Q6UWI2 310 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 TMIGD1Q6UXZ0 262 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 MTSS1LQ765P7 747 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 SATL1Q86VE3 508 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 C17orf64Q86WR6 236 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 ZZZ3Q8IYH5 903 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 ST13P5Q8NFI4 369 aaPredicted RBP22.22■■□□□ 1.15
VPS16-201ENST00000380443 OR5K1Q8NHB7 308 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 RIPOR3Q96MK2 946 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 RHBGQ9H310 441 aa22.22■■□□□ 1.15
VPS16-201ENST00000380443 CARS2Q9HA77 564 aaKnown RBP22.22■■□□□ 1.15
VPS16-201ENST00000380443 CKAP5Q14008 2032 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 DOCK8Q8NF50 2099 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 A0A087WXM4 84 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 TRIM64A6NGJ6 449 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 CPSF4O95639 269 aaKnown RBP22.21■■□□□ 1.15
VPS16-201ENST00000380443 ALPLP05186 524 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 GALK1P51570 392 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 CTBSQ01459 385 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 PDE7AQ13946 482 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 HKDC1Q2TB90 917 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 ZCCHC8Q6NZY4 707 aaKnown RBP22.21■■□□□ 1.15
VPS16-201ENST00000380443 COMMD6Q7Z4G1 85 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 FAM129CQ86XR2 697 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 FAM86B1Q8N7N1 296 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 OR5AR1Q8NGP9 310 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 CDC26Q8NHZ8 85 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 SMPDL3AQ92484 453 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 SH3KBP1Q96B97 665 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 RBM4BQ9BQ04 359 aaKnown RBP22.21■■□□□ 1.15
VPS16-201ENST00000380443 TIMM29Q9BSF4 260 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 RBM4Q9BWF3 364 aaKnown RBP22.21■■□□□ 1.15
VPS16-201ENST00000380443 C1QTNF2Q9BXJ5 285 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 TPT1P8Q9HAU6 139 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 SLC23A2Q9UGH3 650 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 COMMD3-BMI1R4GMX3 469 aa22.21■■□□□ 1.15
VPS16-201ENST00000380443 TRIM64CA6NLI5 447 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 PLOD2O00469 737 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 SEMA3DO95025 777 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 BMP10O95393 424 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 SLC35G4P0C7Q5 338 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 THRBP10828 461 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 DDX5P17844 614 aaKnown RBP22.2■■□□□ 1.14
VPS16-201ENST00000380443 KIR2DL1P43626 348 aaPredicted RBP22.2■■□□□ 1.14
VPS16-201ENST00000380443 NKG7Q16617 165 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.2■■□□□ 1.14
VPS16-201ENST00000380443 SDE2Q6IQ49 451 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 TMEM214Q6NUQ4 689 aaKnown RBP22.2■■□□□ 1.14
VPS16-201ENST00000380443 STK32CQ86UX6 486 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 HIPK1Q86Z02 1210 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 NATD1Q8N6N6 113 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 TRIML2Q8N7C3 387 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 GPR156Q8NFN8 814 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 AIF1LQ9BQI0 150 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 WASH6PQ9NQA3 447 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 SH2B3Q9UQQ2 575 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 PCM1Q15154 2024 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 REV3LO60673 3130 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 LINC01565O15544 149 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 ATP6V1B1P15313 513 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 SGCGQ13326 291 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 RBBP5Q15291 538 aaKnown RBP22.2■■□□□ 1.14
VPS16-201ENST00000380443 TTC23Q5W5X9 447 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 ADNP2Q6IQ32 1131 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 ARMCX6Q7L4S7 300 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 ALDH16A1Q8IZ83 802 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 CLEC4FQ8N1N0 589 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 TP53I13Q8NBR0 393 aaPredicted RBP22.2■■□□□ 1.14
VPS16-201ENST00000380443 SPDYE1Q8NFV5 336 aaPredicted RBP22.2■■□□□ 1.14
VPS16-201ENST00000380443 FGF14Q92915 247 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 LGR4Q9BXB1 951 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 ZDHHC4Q9NPG8 344 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 IFT80Q9P2H3 777 aaPredicted RBP22.2■■□□□ 1.14
VPS16-201ENST00000380443 BTBD3Q9Y2F9 522 aa22.2■■□□□ 1.14
VPS16-201ENST00000380443 C1orf226A1L170 272 aa22.19■■□□□ 1.14
VPS16-201ENST00000380443 WASP42768 502 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms