RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 RYKP34925 604 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 CTSKP43235 329 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 DHPSP49366 369 aaPredicted RBP13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 AFMIDQ63HM1 303 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 MFSD6LQ8IWD5 586 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 CAMKK1Q8N5S9 505 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 HUS1BQ8NHY5 278 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 DNASE1L2Q92874 299 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 TSACCQ96A04 125 aaPredicted RBP13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 C8orf33Q9H7E9 229 aaPredicted RBP13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 HRASLS2Q9NWW9 162 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 PTTG2Q9NZH5 202 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 SPATA7Q9P0W8 599 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 ADAMTS6Q9UKP5 1117 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 GTPBP1O00178 669 aaKnown RBP13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 ADAMDEC1O15204 470 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 C1SP09871 688 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 NKX3-2P78367 333 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 RSBN1Q5VWQ0 802 aaPredicted RBP13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 KCT2Q8NC54 265 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 CAMKVQ8NCB2 501 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 FAM110BQ8TC76 370 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 BIRC7Q96CA5 298 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 TPSD1Q9BZJ3 242 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 MAT2BQ9NZL9 334 aa13.7□□□□□ -0.22
SHROOM1-203ENST00000378679 ARHGEF33A8MVX0 844 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 RTCAO00442 366 aaKnown RBP13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 NUAK1O60285 661 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 NOBOXO60393 691 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 CCR2P41597 374 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 KCNC1P48547 511 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 THAP5Q7Z6K1 395 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 TTC29Q8NA56 475 aaPredicted RBP13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 OR7A2PQ8NGA2 310 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 C3orf30Q96M34 536 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 PKP4Q99569 1192 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 DPH7Q9BTV6 452 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 ANKHQ9HCJ1 492 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 UTS2RQ9UKP6 389 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 CA14Q9ULX7 337 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 H3BNC9 293 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 C6orf47O95873 294 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 CR2P20023 1033 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 GTF2E2P29084 291 aaKnown RBP13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 TTKP33981 857 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 SHMT2P34897 504 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 ENTPD1P49961 510 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 GSTM4Q03013 218 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 PTSQ03393 145 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 SUZ12Q15022 739 aaKnown RBP13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 TOR1AIP1Q5JTV8 583 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 NEK5Q6P3R8 708 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 PLEKHM3Q6ZWE6 761 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 SPNS2Q8IVW8 549 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 CHCHD4Q8N4Q1 142 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 TMIEQ8NEW7 156 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 LMX1AQ8TE12 382 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 FAM3CQ92520 227 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 HTRA1Q92743 480 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 F2RL3Q96RI0 385 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 SDR39U1Q9NRG7 319 aaPredicted RBP13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 CLN6Q9NWW5 311 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 CD207Q9UJ71 328 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 GTF2A1LQ9UNN4 478 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 E7EQ34 232 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 HTRA2O43464 458 aaPredicted RBP13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 CREG1O75629 220 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 NPPAP01160 153 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 CFIP05156 583 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 CAPN3P20807 821 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 ZNF155Q12901 538 aaPredicted RBP13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 SCARB2Q14108 478 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 LARS2Q15031 903 aaKnown RBP13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 FBXO43Q4G163 708 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 C9orf50Q5SZB4 431 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 GALNT18Q6P9A2 607 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 SIX5Q8N196 739 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 OR5AR1Q8NGP9 310 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 ITFG2Q969R8 447 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 CFHR5Q9BXR6 569 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 PDFQ9HBH1 243 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 SLC2A4RGQ9NR83 387 aa13.69□□□□□ -0.22
SHROOM1-203ENST00000378679 MYL12BO14950 172 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 C8orf89P0DMQ9 161 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 AOAHP28039 575 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 PDHA2P29803 388 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 CDK6Q00534 326 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 BNIP3Q12983 259 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 MTAPQ13126 283 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 REEP4Q9H6H4 257 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 HEBP1Q9NRV9 189 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 EVA1BQ9NVM1 165 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 LOC100506127A0A0U1RQW1 187 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 KRT87PA6NCN2 255 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 BCKDKO14874 412 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 TPST2O60704 377 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 IMPDH2P12268 514 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 GNSP15586 552 aa13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 TIA1P31483 386 aaKnown RBP eCLIP13.68□□□□□ -0.22
SHROOM1-203ENST00000378679 FEN1P39748 380 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms