RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 H3BNC9 293 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 HNRNPCP07910 306 aaKnown RBP eCLIP20.49■□□□□ 0.871e-6■■■□□ 15.4
SKI-201ENST00000378536 GPR68Q15743 365 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 ANKRD26P1Q6NSI1 321 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 OR5K1Q8NHB7 308 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 S100A13Q99584 98 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 GPRC5BQ9NZH0 403 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 TP73O15350 636 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 IRS1P35568 1242 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 RAPSNQ13702 412 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 MED22Q15528 200 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 DTD2Q96FN9 168 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 SH3GL3Q99963 347 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 DPH7Q9BTV6 452 aa20.49■□□□□ 0.87
SKI-201ENST00000378536 KLKB1P03952 638 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 CDK6Q00534 326 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 FAM214AQ32MH5 1076 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 TMEM126BQ8IUX1 230 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 ZNF671Q8TAW3 534 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 RIT1Q92963 219 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 HEBP1Q9NRV9 189 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 MS4A12Q9NXJ0 267 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 OAS3Q9Y6K5 1087 aaKnown RBP20.48■□□□□ 0.87
SKI-201ENST00000378536 NUMBLQ9Y6R0 609 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 RIIAD1A6NNX1 92 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 OR10H5Q8NGA6 315 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 MOCOSQ96EN8 888 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 DUX1O43812 170 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 MGRN1O60291 552 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 POU2F1P14859 743 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 SGSHP51688 502 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 BNC1Q01954 994 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 ABRAXAS2Q15018 415 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 PDZK1Q5T2W1 519 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 APOOQ9BUR5 198 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 IL1RAPQ9NPH3 570 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 PNMA8CA0A1B0GUJ8 204 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 KCNC1P48547 511 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 CLCN7P51798 805 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 ABHD18Q0P651 414 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 RSPO2Q6UXX9 243 aaPredicted RBP20.48■□□□□ 0.87
SKI-201ENST00000378536 HIST2H2ABQ8IUE6 130 aaPredicted RBP20.48■□□□□ 0.87
SKI-201ENST00000378536 TSPEARQ8WU66 669 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 KCNC2Q96PR1 638 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 NUAK2Q9H093 628 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 HDHD2Q9H0R4 259 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 CXXC1Q9P0U4 656 aaPredicted RBP20.48■□□□□ 0.87
SKI-201ENST00000378536 HS3ST2Q9Y278 367 aa20.48■□□□□ 0.87
SKI-201ENST00000378536 MPZL2O60487 215 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 GJB3O75712 270 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 CD9P21926 228 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 ADRA1AP35348 466 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 ZNF311Q5JNZ3 666 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 ZCCHC7Q8N3Z6 543 aaKnown RBP20.47■□□□□ 0.87
SKI-201ENST00000378536 ZNF354BQ96LW1 612 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 TBL1XR1Q9BZK7 514 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 RACGAP1Q9H0H5 632 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 WASF2Q9Y6W5 498 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 PRMT3O60678 531 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 HMGA1P17096 107 aaKnown RBP20.47■□□□□ 0.87
SKI-201ENST00000378536 SLC34A3Q8N130 599 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 Q9N2J8 555 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 TIA1P31483 386 aaKnown RBP eCLIP20.47■□□□□ 0.872e-6■■□□□ 13.6
SKI-201ENST00000378536 MRPL58Q14197 206 aaKnown RBP20.47■□□□□ 0.87
SKI-201ENST00000378536 EGFLAMQ63HQ2 1017 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 NRROSQ86YC3 692 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 PIANPQ8IYJ0 282 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 NFKBIDQ8NI38 313 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 PKP4Q99569 1192 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 PRAMEF26H0Y7S4 382 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 IGFBP6P24592 240 aaPredicted RBP20.47■□□□□ 0.87
SKI-201ENST00000378536 RAB28P51157 221 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 RPS15AP62244 130 aaKnown RBP20.47■□□□□ 0.87
SKI-201ENST00000378536 GRB7Q14451 532 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 SPANXN2Q5MJ10 180 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 SLC36A4Q6YBV0 504 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 PCTPQ9UKL6 214 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 GANABQ14697 944 aaKnown RBP20.47■□□□□ 0.87
SKI-201ENST00000378536 TRIQKQ629K1 86 aa20.47■□□□□ 0.87
SKI-201ENST00000378536 GEMIN6Q8WXD5 167 aaKnown RBP20.47■□□□□ 0.87
SKI-201ENST00000378536 FAM170BA6NMN3 283 aa20.46■□□□□ 0.87
SKI-201ENST00000378536 ATXN1LP0C7T5 689 aaKnown RBP20.46■□□□□ 0.87
SKI-201ENST00000378536 SPATS1Q496A3 300 aa20.46■□□□□ 0.87
SKI-201ENST00000378536 EMC10Q5UCC4 262 aa20.46■□□□□ 0.87
SKI-201ENST00000378536 MCEMP1Q8IX19 187 aa20.46■□□□□ 0.87
SKI-201ENST00000378536 OR52B6Q8NGF0 335 aa20.46■□□□□ 0.87
SKI-201ENST00000378536 TMEM74Q96NL1 305 aa20.46■□□□□ 0.87
SKI-201ENST00000378536 TGM7Q96PF1 710 aa20.46■□□□□ 0.87
SKI-201ENST00000378536 EPB41L1Q9H4G0 881 aa20.46■□□□□ 0.87
SKI-201ENST00000378536 GLOD5A6NK44 160 aa20.46■□□□□ 0.87
SKI-201ENST00000378536 GRK6P43250 576 aa20.46■□□□□ 0.87
SKI-201ENST00000378536 PCYT1AP49585 367 aa20.46■□□□□ 0.87
SKI-201ENST00000378536 ANGPT1Q15389 498 aa20.46■□□□□ 0.87
SKI-201ENST00000378536 ZNF630Q2M218 657 aaPredicted RBP20.46■□□□□ 0.87
SKI-201ENST00000378536 HHIPQ96QV1 700 aa20.46■□□□□ 0.87
SKI-201ENST00000378536 CDADC1Q9BWV3 514 aa20.46■□□□□ 0.87
SKI-201ENST00000378536 NEK6Q9HC98 313 aa20.46■□□□□ 0.87
SKI-201ENST00000378536 PDE7BQ9NP56 450 aa20.46■□□□□ 0.87
SKI-201ENST00000378536 WASH3PC4AMC7 463 aa20.46■□□□□ 0.87
SKI-201ENST00000378536 LATO43561 262 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms