RNA–Protein interactions for RNA: ENST00000378060.8

VPS36-201, Transcript of vacuolar protein sorting 36 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS36, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-201ENST00000378060 GDPD4Q6W3E5 623 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 EGFL6Q8IUX8 553 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 CLDN19Q8N6F1 224 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 MRGPRX2Q96LB1 330 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 FRMD6Q96NE9 622 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 ALPK1Q96QP1 1244 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 SPATA9Q9BWV2 254 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 ANKRD60Q9BZ19 345 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 RSPH9Q9H1X1 276 aaPredicted RBP8.13□□□□□ -1.11
VPS36-201ENST00000378060 OR51V1Q9H2C8 321 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 MAGIXQ9H6Y5 334 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 FBXW2Q9UKT8 454 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 EVPLQ92817 2033 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 IGKV6D-21A0A0A0MT36 114 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 OR14I1A6ND48 311 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 OR6C70A6NIJ9 312 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 ZNF879B4DU55 563 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 CCRL2O00421 344 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 XPNPEP2O43895 674 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 VIPP01282 170 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 SPATA31D3P0C874 917 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 GDF5P43026 501 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 GBX2P52951 348 aaPredicted RBP8.13□□□□□ -1.11
VPS36-201ENST00000378060 GRB7Q14451 532 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 ZNF181Q2M3W8 571 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 VMACQ2NL98 169 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 PLA2G4EQ3MJ16 856 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 PRAMEF14Q5SWL7 426 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 UBAP2Q5T6F2 1119 aaKnown RBP8.13□□□□□ -1.11
VPS36-201ENST00000378060 PRAMEF13Q5VWM6 474 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 SPATA31D4Q6ZUB0 917 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 THOC6Q86W42 341 aaKnown RBP8.13□□□□□ -1.11
VPS36-201ENST00000378060 MARCH9Q86YJ5 346 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 DBF4BQ8NFT6 615 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 B3GALT6Q96L58 329 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 MYRFLQ96LU7 910 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 PKP4Q99569 1192 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 IFT27Q9BW83 186 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 COMMD4Q9H0A8 199 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 CCSER2Q9H7U1 834 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 ABCB8Q9NUT2 735 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 SMOXQ9NWM0 555 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 MED11Q9P086 117 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 TNFRSF10DQ9UBN6 386 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 RNF11Q9Y3C5 154 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 PCDHGA4Q9Y5G9 962 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 A0A0X1KG70 313 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 CAPN14A8MX76 684 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 FAM72CH0Y354 149 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 HCRTO43612 131 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 TGFB1P01137 390 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 OPN1SWP03999 348 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 APODP05090 189 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 ALPIP09923 528 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 PTPN2P17706 415 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 GSTM2P28161 218 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 KDELR2P33947 212 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 DGKGP49619 791 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 KCNQ1P51787 676 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 ZNF155Q12901 538 aaPredicted RBP8.13□□□□□ -1.11
VPS36-201ENST00000378060 FAM72AQ5TYM5 149 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 FAM72DQ6L9T8 149 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 SHQ1Q6PI26 577 aaKnown RBP8.13□□□□□ -1.11
VPS36-201ENST00000378060 XKRXQ6PP77 449 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 AGTRAPQ6RW13 159 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 FAM72BQ86X60 149 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 ZFAND4Q86XD8 727 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 RBM12BQ8IXT5 1001 aaKnown RBP8.13□□□□□ -1.11
VPS36-201ENST00000378060 UBE2J2Q8N2K1 259 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 NXPE1Q8N323 547 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 AQP11Q8NBQ7 271 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 LCN9Q8WX39 176 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 LGALS12Q96DT0 336 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 TMEM80Q96HE8 168 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 PHOX2BQ99453 314 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 CCM2Q9BSQ5 444 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 BTBD1Q9H0C5 482 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 TCF7L1Q9HCS4 588 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 GKN1Q9NS71 199 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 ZCWPW2A0A1B0GU75 182 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 TTC24A2A3L6 582 aaPredicted RBP8.13□□□□□ -1.11
VPS36-201ENST00000378060 CPSF4LA6NMK7 179 aaKnown RBP8.13□□□□□ -1.11
VPS36-201ENST00000378060 MID1O15344 667 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 SOCS5O75159 536 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 CNTN5O94779 1100 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 RCBTB2O95199 551 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 PRKCGP05129 697 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 HSD3B1P14060 373 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 HSD3B2P26439 372 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 GRK6P43250 576 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 ARCN1P48444 511 aaKnown RBP8.13□□□□□ -1.11
VPS36-201ENST00000378060 IST1P53990 364 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 VBP1P61758 197 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 ADAM15Q13444 863 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 RNASE12Q5GAN4 147 aaKnown RBP8.13□□□□□ -1.11
VPS36-201ENST00000378060 REEP3Q6NUK4 255 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 PRSS55Q6UWB4 352 aaPredicted RBP8.13□□□□□ -1.11
VPS36-201ENST00000378060 CEP97Q8IW35 865 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 SCML4Q8N228 414 aa8.13□□□□□ -1.11
VPS36-201ENST00000378060 CADM2Q8N3J6 435 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 154.9 ms