RNA–Protein interactions for RNA: ENST00000377575.2

HMGN4-201, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN4, Length 1,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-201ENST00000377575 ZC3H7AQ8IWR0 971 aaKnown RBP15.95■□□□□ 0.14
HMGN4-201ENST00000377575 TCAIMQ8N3R3 496 aa15.95■□□□□ 0.14
HMGN4-201ENST00000377575 EFCAB3Q8N7B9 438 aa15.95■□□□□ 0.14
HMGN4-201ENST00000377575 FBF1Q8TES7 1133 aa15.95■□□□□ 0.14
HMGN4-201ENST00000377575 PNPLA2Q96AD5 504 aa15.95■□□□□ 0.14
HMGN4-201ENST00000377575 AIF1LQ9BQI0 150 aa15.95■□□□□ 0.14
HMGN4-201ENST00000377575 ZNF552Q9H707 407 aaPredicted RBP15.95■□□□□ 0.14
HMGN4-201ENST00000377575 MTRF1LQ9UGC7 380 aaKnown RBP15.95■□□□□ 0.14
HMGN4-201ENST00000377575 SLC22A14Q9Y267 594 aa15.95■□□□□ 0.14
HMGN4-201ENST00000377575 MASP2O00187 686 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 WDR47O94967 919 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 C1QAP02745 245 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 AHRP35869 848 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 MLLT10P55197 1068 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 MAT1AQ00266 395 aaKnown RBP15.94■□□□□ 0.14
HMGN4-201ENST00000377575 REEP5Q00765 189 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 HERC3Q15034 1050 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 TGFBIQ15582 683 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 SYT16Q17RD7 645 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 CATSPEREQ5SY80 951 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 ATG9BQ674R7 924 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 SLC6A19Q695T7 634 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 NIPAL1Q6NVV3 410 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 IGFL3Q6UXB1 125 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 PRSS41Q7RTY9 318 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 LAPTM4BQ86VI4 370 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 ATCAYQ86WG3 371 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 RBMXL3Q8N7X1 1067 aaKnown RBP15.94■□□□□ 0.14
HMGN4-201ENST00000377575 KCT2Q8NC54 265 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 MIB2Q96AX9 1013 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 C8orf44Q96CB5 159 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 RHBDF1Q96CC6 855 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 MACROD1Q9BQ69 325 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 MFRPQ9BY79 579 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 LHPPQ9H008 270 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 CNOT10Q9H9A5 744 aaKnown RBP15.94■□□□□ 0.14
HMGN4-201ENST00000377575 SLAMF7Q9NQ25 335 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 ZDHHC18Q9NUE0 388 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 SLC22A7Q9Y694 548 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 NBASA2RRP1 2371 aa15.94■□□□□ 0.14
HMGN4-201ENST00000377575 NSG1A0A0A6YYJ2 146 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 A0A1W2PQ72 361 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 NCF1BA6NI72 391 aaPredicted RBP15.93■□□□□ 0.14
HMGN4-201ENST00000377575 NCF1CA8MVU1 366 aaPredicted RBP15.93■□□□□ 0.14
HMGN4-201ENST00000377575 BMP10O95393 424 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 ZIC2O95409 532 aaPredicted RBP15.93■□□□□ 0.14
HMGN4-201ENST00000377575 SERPIND1P05546 499 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 COX6A1P12074 109 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 NCF1P14598 390 aaPredicted RBP15.93■□□□□ 0.14
HMGN4-201ENST00000377575 CD1DP15813 335 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 GNAZP19086 355 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 PHBP35232 272 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 SCTRP47872 440 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 SLC6A12P48065 614 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 IGFBP7Q16270 282 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 CDKL4Q5MAI5 379 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 MFSD4BQ5TF39 518 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 AGAP7PQ5VUJ5 663 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 NXPE4Q6UWF7 544 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 RAPH1Q70E73 1250 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 ABHD13Q7L211 337 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 NDUFAF7Q7L592 441 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 GPSM1Q86YR5 675 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 PARP9Q8IXQ6 854 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 KLHDC8AQ8IYD2 350 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 ZADH2Q8N4Q0 377 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 MMGT1Q8N4V1 131 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 CPT1CQ8TCG5 803 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 METTL21AQ8WXB1 218 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 THOC3Q96J01 351 aaKnown RBP15.93■□□□□ 0.14
HMGN4-201ENST00000377575 AGAP4Q96P64 663 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 UNKQ9C0B0 810 aaKnown RBP15.93■□□□□ 0.14
HMGN4-201ENST00000377575 TSPYL1Q9H0U9 437 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 ZNF160Q9HCG1 818 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 RIC8BQ9NVN3 520 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 WWOXQ9NZC7 414 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 HCN3Q9P1Z3 774 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 ZFP69BQ9UJL9 534 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 MKL2Q9ULH7 1088 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 PLAAQ9Y263 795 aa15.93■□□□□ 0.14
HMGN4-201ENST00000377575 CTAGE15A4D2H0 777 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 URADA6NGE7 173 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 SGK494L7N484 410 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 RDH16O75452 317 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 KLHL18O94889 574 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 S100BP04271 92 aaPredicted RBP15.92■□□□□ 0.14
HMGN4-201ENST00000377575 CTAGE8P0CG41 777 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 C8orf89P0DMQ9 161 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 VARSP26640 1264 aaKnown RBP15.92■□□□□ 0.14
HMGN4-201ENST00000377575 CRABP2P29373 138 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 XCR1P46094 333 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 CD97P48960 835 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 AP2B1P63010 937 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 EEF1A2Q05639 463 aaKnown RBP15.92■□□□□ 0.14
HMGN4-201ENST00000377575 CDC16Q13042 620 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 EFTUD2Q15029 972 aaKnown RBP eCLIP15.92■□□□□ 0.14
HMGN4-201ENST00000377575 MINDY4Q4G0A6 757 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 FAAH2Q6GMR7 532 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 CCDC91Q7Z6B0 441 aa15.92■□□□□ 0.14
HMGN4-201ENST00000377575 TBC1D1Q86TI0 1168 aaPredicted RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms