RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 RPS6KA6Q9UK32 745 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 PLAGL1Q9UM63 463 aa19.46■□□□□ 0.71
VSX1-202ENST00000376709 TDRKHQ9Y2W6 561 aaKnown RBP19.46■□□□□ 0.71
VSX1-202ENST00000376709 TRPM6Q9BX84 2022 aa19.45■□□□□ 0.7
VSX1-202ENST00000376709 IGLON5A6NGN9 336 aa19.45■□□□□ 0.7
VSX1-202ENST00000376709 TRIM64CA6NLI5 447 aa19.45■□□□□ 0.7
VSX1-202ENST00000376709 PI15O43692 258 aa19.45■□□□□ 0.7
VSX1-202ENST00000376709 HS6ST1O60243 411 aa19.45■□□□□ 0.7
VSX1-202ENST00000376709 FCHO2Q0JRZ9 810 aa19.45■□□□□ 0.7
VSX1-202ENST00000376709 TTC23Q5W5X9 447 aa19.45■□□□□ 0.7
VSX1-202ENST00000376709 ADAMTSL4Q6UY14 1074 aa19.45■□□□□ 0.7
VSX1-202ENST00000376709 LPCAT2Q7L5N7 544 aa19.45■□□□□ 0.7
VSX1-202ENST00000376709 GALNT10Q86SR1 603 aa19.45■□□□□ 0.7
VSX1-202ENST00000376709 COX14Q96I36 57 aa19.45■□□□□ 0.7
VSX1-202ENST00000376709 KXD1Q9BQD3 176 aa19.45■□□□□ 0.7
VSX1-202ENST00000376709 YTHDF1Q9BYJ9 559 aaKnown RBP19.45■□□□□ 0.7
VSX1-202ENST00000376709 OR51B5Q9H339 312 aa19.45■□□□□ 0.7
VSX1-202ENST00000376709 DDX18Q9NVP1 670 aaKnown RBP19.45■□□□□ 0.7
VSX1-202ENST00000376709 USE1Q9NZ43 259 aa19.45■□□□□ 0.7
VSX1-202ENST00000376709 HCN2Q9UL51 889 aa19.45■□□□□ 0.7
VSX1-202ENST00000376709 NUMA1Q14980 2115 aa19.45■□□□□ 0.7
VSX1-202ENST00000376709 PCDH8O95206 1070 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 MAGEA2P43356 314 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 TPD52P55327 224 aaPredicted RBP19.44■□□□□ 0.7
VSX1-202ENST00000376709 PRAMEF14Q5SWL7 426 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 PRAMEF13Q5VWM6 474 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 ARMCX6Q7L4S7 300 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 GPR155Q7Z3F1 870 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 TMEM179BQ7Z7N9 219 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 PTOV1Q86YD1 416 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 C8orf59Q8N0T1 100 aaPredicted RBP19.44■□□□□ 0.7
VSX1-202ENST00000376709 C2orf73Q8N5S3 287 aaPredicted RBP19.44■□□□□ 0.7
VSX1-202ENST00000376709 COQ8BQ96D53 544 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 CXorf40BQ96DE9 158 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 MYADMQ96S97 322 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 SPNS1Q9H2V7 528 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 FZD4Q9ULV1 537 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 VPS4AQ9UN37 437 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 CORO2BQ9UQ03 480 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 ABCB1P08183 1280 aaPredicted RBP19.44■□□□□ 0.7
VSX1-202ENST00000376709 PRKACGP22612 351 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 PPIBP23284 216 aaKnown RBP19.44■□□□□ 0.7
VSX1-202ENST00000376709 ELK4P28324 431 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 KDELR2P33947 212 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 WASP42768 502 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 YAP1P46937 504 aaKnown RBP19.44■□□□□ 0.7
VSX1-202ENST00000376709 PHEXP78562 749 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 CDK3Q00526 305 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 HYAL1Q12794 435 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 RPA4Q13156 261 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 HIPK1Q86Z02 1210 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 DCUN1D3Q8IWE4 304 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 PGBD3Q8N328 593 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 OR4A15Q8NGL6 344 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 TFGQ92734 400 aaPredicted RBP19.44■□□□□ 0.7
VSX1-202ENST00000376709 CHFRQ96EP1 664 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 PHF12Q96QT6 1004 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 FAM118AQ9NWS6 357 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 MSRAQ9UJ68 235 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 C3orf18Q9UK00 162 aa19.44■□□□□ 0.7
VSX1-202ENST00000376709 MID1O15344 667 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 NTRK1P04629 796 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 KELP23276 732 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 DRD3P35462 400 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 CAMK2GQ13555 558 aaPredicted RBP19.43■□□□□ 0.7
VSX1-202ENST00000376709 ANGPTL8Q6UXH0 198 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 LRRTM4Q86VH4 590 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 CHPFQ8IZ52 775 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 PJA1Q8NG27 643 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 ADAMTS16Q8TE57 1224 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 SETD7Q8WTS6 366 aaKnown RBP19.43■□□□□ 0.7
VSX1-202ENST00000376709 UBE2E3Q969T4 207 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 ACAT2Q9BWD1 397 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 LGR4Q9BXB1 951 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 REEP4Q9H6H4 257 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 IL1RAPQ9NPH3 570 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 ATAD3AQ9NVI7 634 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 IFT80Q9P2H3 777 aaPredicted RBP19.43■□□□□ 0.7
VSX1-202ENST00000376709 BAG5Q9UL15 447 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 ORC6Q9Y5N6 252 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 C1orf226A1L170 272 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 RNASET2O00584 256 aaKnown RBP19.43■□□□□ 0.7
VSX1-202ENST00000376709 FKBP9O95302 570 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 EEF1B2P24534 225 aaKnown RBP19.43■□□□□ 0.7
VSX1-202ENST00000376709 SHMT2P34897 504 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 LRRC74AQ0VAA2 488 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 GAB1Q13480 694 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 C16orf72Q14CZ0 275 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 ANKRD34AQ69YU3 496 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 ANKRD54Q6NXT1 300 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP19.43■□□□□ 0.7
VSX1-202ENST00000376709 THAP5Q7Z6K1 395 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 ZNF740Q8NDX6 193 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 MBOAT4Q96T53 435 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 SPATA9Q9BWV2 254 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 BHLHE41Q9C0J9 482 aaPredicted RBP19.43■□□□□ 0.7
VSX1-202ENST00000376709 SLC28A3Q9HAS3 691 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 ZNF282Q9UDV7 671 aaPredicted RBP19.43■□□□□ 0.7
VSX1-202ENST00000376709 SLC23A2Q9UGH3 650 aa19.43■□□□□ 0.7
VSX1-202ENST00000376709 ABCG2Q9UNQ0 655 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms