RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 CATSPEREQ5SY80 951 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 DUS1LQ6P1R4 473 aaKnown RBP20.32■□□□□ 0.84
HLA-C-201ENST00000376228 PRMT9Q6P2P2 845 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 C17orf64Q86WR6 236 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 DPP10Q8N608 796 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 ABHD11Q8NFV4 315 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 TSACCQ96A04 125 aaPredicted RBP20.32■□□□□ 0.84
HLA-C-201ENST00000376228 CDRT15Q96T59 188 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 GPATCH1Q9BRR8 931 aaKnown RBP20.32■□□□□ 0.84
HLA-C-201ENST00000376228 NT5DC2Q9H857 520 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 PRDM8Q9NQV8 689 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 IMP3Q9NV31 184 aaKnown RBP20.32■□□□□ 0.84
HLA-C-201ENST00000376228 GID8Q9NWU2 228 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 LEF1Q9UJU2 399 aaPredicted RBP20.32■□□□□ 0.84
HLA-C-201ENST00000376228 WASF3Q9UPY6 502 aa20.32■□□□□ 0.84
HLA-C-201ENST00000376228 PIPSLA2A3N6 862 aa20.31■□□□□ 0.84
HLA-C-201ENST00000376228 A6NCN8 305 aa20.31■□□□□ 0.84
HLA-C-201ENST00000376228 TRIM38O00635 465 aa20.31■□□□□ 0.84
HLA-C-201ENST00000376228 TNFP01375 233 aa20.31■□□□□ 0.84
HLA-C-201ENST00000376228 CXCR2P25025 360 aa20.31■□□□□ 0.84
HLA-C-201ENST00000376228 HNRNPH1P31943 449 aaKnown RBP20.31■□□□□ 0.84
HLA-C-201ENST00000376228 PIK3CBP42338 1070 aa20.31■□□□□ 0.84
HLA-C-201ENST00000376228 CLDN8P56748 225 aa20.31■□□□□ 0.84
HLA-C-201ENST00000376228 SLBPQ14493 270 aaKnown RBP eCLIP20.31■□□□□ 0.84
HLA-C-201ENST00000376228 KPNB1Q14974 876 aaKnown RBP20.31■□□□□ 0.84
HLA-C-201ENST00000376228 TCEA2Q15560 299 aa20.31■□□□□ 0.84
HLA-C-201ENST00000376228 THEMIS2Q5TEJ8 643 aa20.31■□□□□ 0.84
HLA-C-201ENST00000376228 LIX1Q8N485 282 aa20.31■□□□□ 0.84
HLA-C-201ENST00000376228 ZNF548Q8NEK5 533 aaPredicted RBP20.31■□□□□ 0.84
HLA-C-201ENST00000376228 OR4K1Q8NGD4 311 aa20.31■□□□□ 0.84
HLA-C-201ENST00000376228 ZBTB18Q99592 522 aa20.31■□□□□ 0.84
HLA-C-201ENST00000376228 SCNM1Q9BWG6 230 aa20.31■□□□□ 0.84
HLA-C-201ENST00000376228 NMRK1Q9NWW6 199 aa20.31■□□□□ 0.84
HLA-C-201ENST00000376228 TBC1D29Q9UFV1 150 aa20.31■□□□□ 0.84
HLA-C-201ENST00000376228 ADGRE2Q9UHX3 823 aa20.31■□□□□ 0.84
HLA-C-201ENST00000376228 RUVBL1Q9Y265 456 aaKnown RBP20.31■□□□□ 0.84
HLA-C-201ENST00000376228 FRYQ5TBA9 3013 aa20.3■□□□□ 0.84
HLA-C-201ENST00000376228 CCDC154A6NI56 674 aa20.3■□□□□ 0.84
HLA-C-201ENST00000376228 SCAMP1O15126 338 aa20.3■□□□□ 0.84
HLA-C-201ENST00000376228 CFLARO15519 480 aa20.3■□□□□ 0.84
HLA-C-201ENST00000376228 SIGLEC6O43699 453 aa20.3■□□□□ 0.84
HLA-C-201ENST00000376228 HNRNPKP61978 463 aaKnown RBP eCLIP20.3■□□□□ 0.84
HLA-C-201ENST00000376228 SPATS1Q496A3 300 aa20.3■□□□□ 0.84
HLA-C-201ENST00000376228 KRT78Q8N1N4 520 aa20.3■□□□□ 0.84
HLA-C-201ENST00000376228 LINC01555Q8NAE3 123 aa20.3■□□□□ 0.84
HLA-C-201ENST00000376228 HUS1BQ8NHY5 278 aa20.3■□□□□ 0.84
HLA-C-201ENST00000376228 GPBAR1Q8TDU6 330 aa20.3■□□□□ 0.84
HLA-C-201ENST00000376228 APIPQ96GX9 242 aa20.3■□□□□ 0.84
HLA-C-201ENST00000376228 DCLRE1BQ9H816 532 aa20.3■□□□□ 0.84
HLA-C-201ENST00000376228 SCHIP1Q9P0W5 487 aaPredicted RBP20.3■□□□□ 0.84
HLA-C-201ENST00000376228 APOBEC3BQ9UH17 382 aaKnown RBP20.3■□□□□ 0.84
HLA-C-201ENST00000376228 KLK13Q9UKR3 277 aa20.3■□□□□ 0.84
HLA-C-201ENST00000376228 POMPQ9Y244 141 aa20.3■□□□□ 0.84
HLA-C-201ENST00000376228 ARHGEF17Q96PE2 2063 aaPredicted RBP20.3■□□□□ 0.84
HLA-C-201ENST00000376228 ASPDHA6ND91 283 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 PRMT3O60678 531 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 ENTPD5O75356 428 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 GIMD1P0DJR0 217 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 CLNS1AP54105 237 aaKnown RBP20.29■□□□□ 0.84
HLA-C-201ENST00000376228 C21orf58P58505 322 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 TSTA3Q13630 321 aaPredicted RBP20.29■□□□□ 0.84
HLA-C-201ENST00000376228 KRT33BQ14525 404 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 C1orf146Q5VVC0 180 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 RIPOR1Q6ZS17 1223 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 PHACTR4Q8IZ21 702 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 ENDOVQ8N8Q3 282 aaKnown RBP20.29■□□□□ 0.84
HLA-C-201ENST00000376228 OR52E1Q8NGJ3 308 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 LMX1AQ8TE12 382 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 ZFPM2Q8WW38 1151 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 MTERF1Q99551 399 aaKnown RBP20.29■□□□□ 0.84
HLA-C-201ENST00000376228 DPY30Q9C005 99 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 TWSG1Q9GZX9 223 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 TMEM168Q9H0V1 697 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 RHBGQ9H310 441 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 CLMPQ9H6B4 373 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 SPAG4Q9NPE6 437 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 TMEM181Q9P2C4 612 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 TAC3Q9UHF0 121 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 DLGAP4Q9Y2H0 992 aa20.29■□□□□ 0.84
HLA-C-201ENST00000376228 OR52A4PA6NMU1 304 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 MAGEB17A8MXT2 336 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 FXYD1O00168 92 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 PRICKLE3O43900 615 aaPredicted RBP20.28■□□□□ 0.84
HLA-C-201ENST00000376228 RASGRP1O95267 797 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 IL6P05231 212 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 CDH1P12830 882 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 MYF5P13349 255 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 F3P13726 295 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 ME2P23368 584 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 SERPINB1P30740 379 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 PHEXP78562 749 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 SHC2P98077 582 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 C1orf61Q13536 156 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 CEACAM7Q14002 265 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 PTGR1Q14914 329 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 SPIN4Q56A73 249 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 NOXRED1Q6NXP6 359 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 GALNT18Q6P9A2 607 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 RD3Q7Z3Z2 195 aa20.28■□□□□ 0.84
HLA-C-201ENST00000376228 PACS2Q86VP3 889 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms