RNA–Protein interactions for RNA: ENST00000373388.6

CSMD2-206, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSMD2, Length 13,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-206ENST00000373388 SNTB2Q13425 540 aaKnown RBP6.85□□□□□ -1.31
CSMD2-206ENST00000373388 ARFRP1Q13795 201 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 ARL13AQ5H913 290 aaPredicted RBP6.85□□□□□ -1.31
CSMD2-206ENST00000373388 SLC30A6Q6NXT4 461 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 ZNF705AQ6ZN79 300 aaPredicted RBP6.85□□□□□ -1.31
CSMD2-206ENST00000373388 CLRN3Q8NCR9 226 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 MASTLQ96GX5 879 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 OCSTAMPQ9BR26 566 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 NIPSNAP3BQ9BS92 247 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 ASPNQ9BXN1 380 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 TNFRSF10BO14763 440 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 IRF1P10914 325 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 LAMP2P13473 410 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 H3F3AP84243 136 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 HTD2P86397 168 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 ZNF543Q08ER8 600 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 DPY19L4Q7Z388 723 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 TPT1P8Q9HAU6 139 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 MRPL22Q9NWU5 206 aaKnown RBP6.85□□□□□ -1.31
CSMD2-206ENST00000373388 ZNF20P17024 532 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 MIPP30301 263 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 TGM4P49221 684 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 STXBP1P61764 594 aaKnown RBP6.85□□□□□ -1.31
CSMD2-206ENST00000373388 SLC17A1Q14916 467 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 ATXN7L3Q14CW9 347 aaPredicted RBP6.85□□□□□ -1.31
CSMD2-206ENST00000373388 SFT2D3Q587I9 215 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 METAP1DQ6UB28 335 aaPredicted RBP6.85□□□□□ -1.31
CSMD2-206ENST00000373388 LIX1Q8N485 282 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 SLC30A7Q8NEW0 376 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 ZNF251Q9BRH9 671 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 FAM212BQ9NTI7 297 aaPredicted RBP6.85□□□□□ -1.31
CSMD2-206ENST00000373388 ABI2Q9NYB9 513 aaPredicted RBP6.85□□□□□ -1.31
CSMD2-206ENST00000373388 EBF1Q9UH73 591 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 ZNF587BE7ETH6 402 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 RBBP9O75884 186 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 CTDNEP1O95476 244 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 MANFP55145 182 aaKnown RBP6.85□□□□□ -1.31
CSMD2-206ENST00000373388 CD81P60033 236 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 RETSATQ6NUM9 610 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 GPR149Q86SP6 731 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 ADAMTS16Q8TE57 1224 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 RADILQ96JH8 1075 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 SPHK1Q9NYA1 384 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 MRPS33Q9Y291 106 aaKnown RBP6.85□□□□□ -1.31
CSMD2-206ENST00000373388 FAM96BQ9Y3D0 163 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 GLI2P10070 1586 aa6.85□□□□□ -1.31
CSMD2-206ENST00000373388 SCN3AQ9NY46 2000 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 RFXAPO00287 272 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 ADAMTS3O15072 1205 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 FABP1P07148 127 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 PLA2G16P53816 162 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 HADHBP55084 474 aaKnown RBP6.84□□□□□ -1.31
CSMD2-206ENST00000373388 SPP2Q13103 211 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 NTRK3Q16288 839 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 C4orf17Q53FE4 359 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 C10orf62Q5T681 223 aaPredicted RBP6.84□□□□□ -1.31
CSMD2-206ENST00000373388 OR6Q1Q8NGQ2 317 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 RBPMSQ93062 196 aaKnown RBP6.84□□□□□ -1.31
CSMD2-206ENST00000373388 LRRC58Q96CX6 371 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 USP32Q8NFA0 1604 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 TRAV20A0A0B4J274 112 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 FFAR3O14843 346 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 GPR42O15529 346 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 NOBOXO60393 691 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 STAG3L2P0CL84 134 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 PSMB4P28070 264 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 BAG6P46379 1132 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 SCNN1GP51170 649 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 PUM1Q14671 1186 aaKnown RBP eCLIP6.84□□□□□ -1.31
CSMD2-206ENST00000373388 EML3Q32P44 896 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 SMARCD2Q92925 531 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 TMEM176AQ96HP8 235 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 CRB3Q9BUF7 120 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 ERVMER34-1Q9H9K5 563 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 ATP13A1Q9HD20 1204 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 ENY2Q9NPA8 101 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 DUSP22Q9NRW4 184 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 TMEM100Q9NV29 134 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 RNF215Q9Y6U7 377 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 H3BMQ9 156 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 SPDEFO95238 335 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 ACVR2AP27037 513 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 LHX1P48742 406 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 KCTD9Q7L273 389 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 SNX29P2Q8IUI4 249 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 OR52J3Q8NH60 311 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 OR52A5Q9H2C5 316 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 ABHD14A-ACY1A0A1B0GW23 586 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 FOXO4P98177 505 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 PRKCZQ05513 592 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 PROX2Q3B8N5 592 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 ZNF852Q6ZMS4 543 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 OR10A6Q8NH74 314 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 ZNF606Q8WXB4 792 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 ADIPOR1Q96A54 375 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 ELP4Q96EB1 424 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 ACTRT3Q9BYD9 372 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 LIN28AQ9H9Z2 209 aaKnown RBP6.84□□□□□ -1.31
CSMD2-206ENST00000373388 MIOSQ9NXC5 875 aa6.84□□□□□ -1.31
CSMD2-206ENST00000373388 VWA7Q9Y334 891 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms