RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 NTSP30990 170 aa17.07■□□□□ 0.32
TRAF3IP1-201ENST00000373327 VEGFBP49765 207 aa17.07■□□□□ 0.32
TRAF3IP1-201ENST00000373327 CDK6Q00534 326 aa17.07■□□□□ 0.32
TRAF3IP1-201ENST00000373327 TAB1Q15750 504 aa17.07■□□□□ 0.32
TRAF3IP1-201ENST00000373327 CLEC12AQ5QGZ9 265 aa17.07■□□□□ 0.32
TRAF3IP1-201ENST00000373327 PRAMEF14Q5SWL7 426 aa17.07■□□□□ 0.32
TRAF3IP1-201ENST00000373327 PRAMEF13Q5VWM6 474 aa17.07■□□□□ 0.32
TRAF3IP1-201ENST00000373327 DUS1LQ6P1R4 473 aaKnown RBP17.07■□□□□ 0.32
TRAF3IP1-201ENST00000373327 MEX3DQ86XN8 651 aaKnown RBP17.07■□□□□ 0.32
TRAF3IP1-201ENST00000373327 AMER2Q8N7J2 671 aa17.07■□□□□ 0.32
TRAF3IP1-201ENST00000373327 INTS6Q9UL03 887 aaKnown RBP17.07■□□□□ 0.32
TRAF3IP1-201ENST00000373327 PARP14Q460N5 1801 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 ABHD14A-ACY1A0A1B0GW23 586 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 ZNF8P17098 575 aaPredicted RBP17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 SLC36A3Q495N2 470 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 FAM26DQ5JW98 314 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 ZDHHC20Q5W0Z9 365 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 TMIGD1Q6UXZ0 262 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 KRT73Q86Y46 540 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 EID2BQ96D98 161 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 F2RL3Q96RI0 385 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 TTLL2Q9BWV7 592 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 PIGAP37287 484 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 CLCN2P51788 898 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 RPP38P78345 283 aaKnown RBP17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 PTSQ03393 145 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 C16orf62Q7Z3J2 963 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 TMEM145Q8NBT3 493 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 FAR1Q8WVX9 515 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 NEIL2Q969S2 332 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 GPATCH1Q9BRR8 931 aaKnown RBP17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 A0A096LPI6 279 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 TSPAN12O95859 305 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 TSPAN19P0C672 248 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 HLCSP50747 726 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 MRPL58Q14197 206 aaKnown RBP17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 ZNF740Q8NDX6 193 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 UBE2E3Q969T4 207 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 MTERF3Q96E29 417 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 ZNF385DQ9H6B1 395 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 C8orf4Q9NR00 106 aa17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 CNOT11Q9UKZ1 510 aaKnown RBP17.06■□□□□ 0.32
TRAF3IP1-201ENST00000373327 SLC1A7O00341 560 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 IL3P08700 152 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 TARDBPQ13148 414 aaKnown RBP eCLIP17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 ZNF551Q7Z340 670 aaPredicted RBP17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 ZNF554Q86TJ5 538 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 TCEAL8Q8IYN2 117 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 ZNF683Q8IZ20 524 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 FEVQ99581 238 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 TRIM45Q9H8W5 580 aaPredicted RBP17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 ATP6V1HQ9UI12 483 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 ERGIC3Q9Y282 383 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 PIPSLA2A3N6 862 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 BMP10O95393 424 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 CH25HO95992 272 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 IGLV3-27P01718 113 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 LCKP06239 509 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 ITGA2P17301 1181 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 FPR1P21462 350 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 TIE1P35590 1138 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 KRT20P35900 424 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 FEN1P39748 380 aaKnown RBP17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 NCF4Q15080 339 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 VITQ6UXI7 678 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 C10orf53Q8N6V4 93 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 OR7G3Q8NG95 312 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 COX4I2Q96KJ9 171 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 UGT2B15P54855 530 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 GRIK2Q13002 908 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 TIGD6Q17RP2 521 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 RSBN1Q5VWQ0 802 aaPredicted RBP17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 C7orf61Q8IZ16 206 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 RNF31Q96EP0 1072 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 C17orf62Q9BQA9 187 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 HEBP1Q9NRV9 189 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 PCDHGB3Q9Y5G1 929 aa17.05■□□□□ 0.32
TRAF3IP1-201ENST00000373327 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 ADAMDEC1O15204 470 aa17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 F11P03951 625 aa17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 RPN2P04844 631 aa17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 ACADMP11310 421 aa17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 MATN1P21941 496 aa17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 PPIBP23284 216 aaKnown RBP17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 CA5AP35218 305 aa17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 ZNF846Q147U1 533 aa17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 CYHR1Q6ZMK1 362 aa17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 ZSWIM9Q86XI8 627 aa17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 AQP11Q8NBQ7 271 aa17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 KCT2Q8NC54 265 aa17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 UBASH3BQ8TF42 649 aa17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 DNAJC27Q9NZQ0 273 aa17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 STOX2Q9P2F5 926 aaPredicted RBP17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 SLC9A8Q9Y2E8 581 aa17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 PLXNB2O15031 1838 aa17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 A0A0J9YVX5 310 aa17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 CBSLP0DN79 551 aa17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 JUPP14923 745 aa17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 MYL12AP19105 171 aa17.04■□□□□ 0.32
TRAF3IP1-201ENST00000373327 CBSP35520 551 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms