RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 SORBS1Q9BX66 1292 aaKnown RBP22.93■■□□□ 1.26
CDK9-201ENST00000373264 CHST8Q9H2A9 424 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 TMEM184CQ9NVA4 438 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 IRAK3Q9Y616 596 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 LILRB5O75023 590 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 ZNF8P17098 575 aaPredicted RBP22.93■■□□□ 1.26
CDK9-201ENST00000373264 PCMT1P22061 227 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 RAD23AP54725 363 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 EPS8Q12929 822 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 SLBPQ14493 270 aaKnown RBP eCLIP22.93■■□□□ 1.26
CDK9-201ENST00000373264 SPCS2Q15005 226 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 IQCCQ4KMZ1 466 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 MSANTD1Q6ZTZ1 278 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 CBLL1Q75N03 491 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 CCDC71Q8IV32 467 aaPredicted RBP22.93■■□□□ 1.26
CDK9-201ENST00000373264 ZNF547Q8IVP9 402 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 C12orf76Q8N812 135 aaPredicted RBP22.93■■□□□ 1.26
CDK9-201ENST00000373264 SPPL3Q8TCT6 385 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 ATL1Q8WXF7 558 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 C11orf49Q9H6J7 331 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 TM9SF3Q9HD45 589 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 ORC6Q9Y5N6 252 aa22.93■■□□□ 1.26
CDK9-201ENST00000373264 MGAT4DA6NG13 374 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 FUT4P22083 530 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 KDM4DQ6B0I6 523 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 ERAP2Q6P179 960 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 TSEN54Q7Z6J9 526 aaKnown RBP22.92■■□□□ 1.26
CDK9-201ENST00000373264 HORMAD1Q86X24 394 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 FKBP10Q96AY3 582 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 DTD2Q96FN9 168 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 NODALQ96S42 347 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 FAM83CQ9BQN1 747 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 RASSF1Q9NS23 344 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 MYO1DO94832 1006 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 HBA1P69905 142 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 NFE2L1Q14494 772 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 RGNQ15493 299 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 SLC16A12Q6ZSM3 486 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 NPAS3Q8IXF0 933 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 OR4A15Q8NGL6 344 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 OR5AK3PQ8NH89 298 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 ZFP90Q8TF47 636 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 ABTB1Q969K4 478 aaPredicted RBP22.92■■□□□ 1.26
CDK9-201ENST00000373264 COQ10AQ96MF6 247 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 RHBDL2Q9NX52 303 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 MARK1Q9P0L2 795 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 KCNE2Q9Y6J6 123 aa22.92■■□□□ 1.26
CDK9-201ENST00000373264 PRMT3O60678 531 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 EFCAB14O75071 495 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 KLHL18O94889 574 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 ANGPTL1O95841 491 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 ADH5P11766 374 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 ETFAP13804 333 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 DDX6P26196 483 aaKnown RBP eCLIP22.91■■□□□ 1.263e-7■□□□□ 8.6
CDK9-201ENST00000373264 CD6P30203 668 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 TIA1P31483 386 aaKnown RBP eCLIP22.91■■□□□ 1.263e-6■□□□□ 10.9
CDK9-201ENST00000373264 EMX1Q04741 257 aaPredicted RBP22.91■■□□□ 1.26
CDK9-201ENST00000373264 RAET1GQ6H3X3 334 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 EIF3MQ7L2H7 374 aaKnown RBP22.91■■□□□ 1.26
CDK9-201ENST00000373264 TRMT11Q7Z4G4 463 aaKnown RBP22.91■■□□□ 1.26
CDK9-201ENST00000373264 CACUL1Q86Y37 369 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 FAM81AQ8TBF8 368 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 BAG5Q9UL15 447 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 INSL6Q9Y581 213 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 J3QRK9 145 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 KCNJ10P78508 379 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 MPEG1Q2M385 716 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 MED27Q6P2C8 311 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 FAM83HQ6ZRV2 1179 aaPredicted RBP22.91■■□□□ 1.26
CDK9-201ENST00000373264 PIWIL3Q7Z3Z3 882 aaKnown RBP22.91■■□□□ 1.26
CDK9-201ENST00000373264 COMMD6Q7Z4G1 85 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 NLRP8Q86W28 1048 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 C7orf34Q96L11 122 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 FOPNLQ96NB1 174 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 ACAT2Q9BWD1 397 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 THUMPD1Q9NXG2 353 aaKnown RBP22.91■■□□□ 1.26
CDK9-201ENST00000373264 DKK3Q9UBP4 350 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 TMEM98Q9Y2Y6 226 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 PLXND1Q9Y4D7 1925 aa22.91■■□□□ 1.26
CDK9-201ENST00000373264 KIAA0355O15063 1070 aa22.9■■□□□ 1.26
CDK9-201ENST00000373264 CRATP43155 626 aa22.9■■□□□ 1.26
CDK9-201ENST00000373264 RANBP1P43487 201 aa22.9■■□□□ 1.26
CDK9-201ENST00000373264 OR1E2P47887 323 aa22.9■■□□□ 1.26
CDK9-201ENST00000373264 TMBIM6P55061 237 aa22.9■■□□□ 1.26
CDK9-201ENST00000373264 MUL1Q969V5 352 aa22.9■■□□□ 1.26
CDK9-201ENST00000373264 TRIT1Q9H3H1 467 aaKnown RBP22.9■■□□□ 1.26
CDK9-201ENST00000373264 BRF2Q9HAW0 419 aa22.9■■□□□ 1.26
CDK9-201ENST00000373264 IL23AQ9NPF7 189 aa22.9■■□□□ 1.26
CDK9-201ENST00000373264 SAGE1Q9NXZ1 904 aa22.9■■□□□ 1.26
CDK9-201ENST00000373264 NFKBIL1Q9UBC1 381 aaPredicted RBP22.9■■□□□ 1.26
CDK9-201ENST00000373264 NOL3O60936 208 aaKnown RBP22.9■■□□□ 1.26
CDK9-201ENST00000373264 C6orf47O95873 294 aa22.9■■□□□ 1.26
CDK9-201ENST00000373264 ITGAMP11215 1152 aa22.9■■□□□ 1.26
CDK9-201ENST00000373264 DNAJA1P31689 397 aaKnown RBP22.9■■□□□ 1.26
CDK9-201ENST00000373264 RYKP34925 604 aa22.9■■□□□ 1.26
CDK9-201ENST00000373264 BMPR1AP36894 532 aa22.9■■□□□ 1.26
CDK9-201ENST00000373264 MVDP53602 400 aa22.9■■□□□ 1.26
CDK9-201ENST00000373264 TTC29Q8NA56 475 aaPredicted RBP22.9■■□□□ 1.26
CDK9-201ENST00000373264 ATG16L2Q8NAA4 619 aa22.9■■□□□ 1.26
CDK9-201ENST00000373264 PLGRKTQ9HBL7 147 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms