RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 KCTD21Q4G0X4 260 aa12.88□□□□□ -0.35
CSTF2-201ENST00000372972 CPZQ66K79 652 aa12.88□□□□□ -0.35
CSTF2-201ENST00000372972 COMMD6Q7Z4G1 85 aa12.88□□□□□ -0.35
CSTF2-201ENST00000372972 ZNF786Q8N393 782 aa12.88□□□□□ -0.35
CSTF2-201ENST00000372972 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.88□□□□□ -0.356e-8■■■■□ 22.3
CSTF2-201ENST00000372972 FBXL20Q96IG2 436 aa12.88□□□□□ -0.35
CSTF2-201ENST00000372972 IL17FQ96PD4 163 aa12.88□□□□□ -0.35
CSTF2-201ENST00000372972 PRO3102Q9H379 93 aa12.88□□□□□ -0.35
CSTF2-201ENST00000372972 MBNL1Q9NR56 388 aaKnown RBP12.88□□□□□ -0.35
CSTF2-201ENST00000372972 ATP6V1HQ9UI12 483 aa12.88□□□□□ -0.35
CSTF2-201ENST00000372972 UTS2RQ9UKP6 389 aa12.88□□□□□ -0.35
CSTF2-201ENST00000372972 SAMD4AQ9UPU9 718 aaKnown RBP12.88□□□□□ -0.35
CSTF2-201ENST00000372972 TDRKHQ9Y2W6 561 aaKnown RBP12.88□□□□□ -0.35
CSTF2-201ENST00000372972 TICRRQ7Z2Z1 1910 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 KLHL33A6NCF5 533 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 GPR89AB7ZAQ6 455 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 ANHXE9PGG2 379 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 C1QCP02747 245 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 GPR89BP0CG08 455 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 PPIBP23284 216 aaKnown RBP12.87□□□□□ -0.35
CSTF2-201ENST00000372972 TEAD1P28347 426 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 TRIM23P36406 574 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 HSD17B2P37059 387 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 TNFRSF4P43489 277 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 VAC14Q08AM6 782 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 COL19A1Q14993 1142 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 C2orf27AQ580R0 203 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 ABRAXAS1Q6UWZ7 409 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 TMIGD1Q6UXZ0 262 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 RBM44Q6ZP01 1051 aaKnown RBP12.87□□□□□ -0.35
CSTF2-201ENST00000372972 USP51Q70EK9 711 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 ARMCX6Q7L4S7 300 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 GPR155Q7Z3F1 870 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 ZZZ3Q8IYH5 903 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 ZCCHC7Q8N3Z6 543 aaKnown RBP12.87□□□□□ -0.35
CSTF2-201ENST00000372972 OR5K2Q8NHB8 316 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 NCSTNQ92542 709 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 NECTIN4Q96NY8 510 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 BHLHE41Q9C0J9 482 aaPredicted RBP12.87□□□□□ -0.35
CSTF2-201ENST00000372972 SPNS1Q9H2V7 528 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 OR51B5Q9H339 312 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 REEP4Q9H6H4 257 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 TPT1P8Q9HAU6 139 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 TM7SF3Q9NS93 570 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 SH3BP4Q9P0V3 963 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 SERGEFQ9UGK8 458 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 PLAGL1Q9UM63 463 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 MAGED1Q9Y5V3 778 aaPredicted RBP12.87□□□□□ -0.35
CSTF2-201ENST00000372972 GMEB1Q9Y692 573 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 A0A1W2PP55 124 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 ENO4A6NNW6 628 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 K7EQS6 105 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 RNASET2O00584 256 aaKnown RBP12.87□□□□□ -0.35
CSTF2-201ENST00000372972 SEC24DO94855 1032 aaPredicted RBP12.87□□□□□ -0.35
CSTF2-201ENST00000372972 CLIC3O95833 236 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 THRBP10828 461 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 ERGP11308 486 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 IGFBP4P22692 258 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 PTX3P26022 381 aaPredicted RBP12.87□□□□□ -0.35
CSTF2-201ENST00000372972 SEC13P55735 322 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 R3HCC1LQ7Z5L2 792 aaKnown RBP12.87□□□□□ -0.35
CSTF2-201ENST00000372972 KRT78Q8N1N4 520 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 METTL4Q8N3J2 472 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 C2orf73Q8N5S3 287 aaPredicted RBP12.87□□□□□ -0.35
CSTF2-201ENST00000372972 ZNF740Q8NDX6 193 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 EZH1Q92800 747 aaPredicted RBP12.87□□□□□ -0.35
CSTF2-201ENST00000372972 RDH12Q96NR8 316 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 SPATA9Q9BWV2 254 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 WDR26Q9H7D7 661 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 PAPOLBQ9NRJ5 636 aaKnown RBP12.87□□□□□ -0.35
CSTF2-201ENST00000372972 ATAD3AQ9NVI7 634 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 TUBA8Q9NY65 449 aaPredicted RBP12.87□□□□□ -0.35
CSTF2-201ENST00000372972 CORO2BQ9UQ03 480 aa12.87□□□□□ -0.35
CSTF2-201ENST00000372972 EXO1Q9UQ84 846 aaKnown RBP12.87□□□□□ -0.35
CSTF2-201ENST00000372972 A0A087WXM4 84 aa12.86□□□□□ -0.35
CSTF2-201ENST00000372972 C1orf226A1L170 272 aa12.86□□□□□ -0.35
CSTF2-201ENST00000372972 SAP18O00422 153 aaKnown RBP12.86□□□□□ -0.35
CSTF2-201ENST00000372972 VILLO15195 856 aa12.86□□□□□ -0.35
CSTF2-201ENST00000372972 ZNF682O95780 498 aa12.86□□□□□ -0.35
CSTF2-201ENST00000372972 PAK4O96013 591 aaPredicted RBP12.86□□□□□ -0.35
CSTF2-201ENST00000372972 EFNA1P20827 205 aaPredicted RBP12.86□□□□□ -0.35
CSTF2-201ENST00000372972 KDELR2P33947 212 aa12.86□□□□□ -0.35
CSTF2-201ENST00000372972 TIE1P35590 1138 aa12.86□□□□□ -0.35
CSTF2-201ENST00000372972 RPL3P39023 403 aaKnown RBP12.86□□□□□ -0.35
CSTF2-201ENST00000372972 IST1P53990 364 aa12.86□□□□□ -0.35
CSTF2-201ENST00000372972 CYP2A13Q16696 494 aa12.86□□□□□ -0.35
CSTF2-201ENST00000372972 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.86□□□□□ -0.35
CSTF2-201ENST00000372972 ZNF776Q68DI1 518 aaPredicted RBP12.86□□□□□ -0.35
CSTF2-201ENST00000372972 BORAQ6PGQ7 559 aa12.86□□□□□ -0.35
CSTF2-201ENST00000372972 FAM129CQ86XR2 697 aa12.86□□□□□ -0.35
CSTF2-201ENST00000372972 PTOV1Q86YD1 416 aa12.86□□□□□ -0.35
CSTF2-201ENST00000372972 OR5K1Q8NHB7 308 aa12.86□□□□□ -0.35
CSTF2-201ENST00000372972 ZFP28Q8NHY6 868 aa12.86□□□□□ -0.35
CSTF2-201ENST00000372972 WDR48Q8TAF3 677 aa12.86□□□□□ -0.35
CSTF2-201ENST00000372972 C16orf78Q8WTQ4 265 aa12.86□□□□□ -0.35
CSTF2-201ENST00000372972 OSBPL10Q9BXB5 764 aa12.86□□□□□ -0.35
CSTF2-201ENST00000372972 SOX17Q9H6I2 414 aaPredicted RBP12.86□□□□□ -0.35
CSTF2-201ENST00000372972 USE1Q9NZ43 259 aa12.86□□□□□ -0.35
CSTF2-201ENST00000372972 ZNF282Q9UDV7 671 aaPredicted RBP12.86□□□□□ -0.35
CSTF2-201ENST00000372972 CD207Q9UJ71 328 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms