RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 CABS1Q96KC9 395 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 BMFQ96LC9 184 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 FAM111AQ96PZ2 611 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 GPR174Q9BXC1 333 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 TEX101Q9BY14 249 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 OR2AG1Q9H205 316 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 CNOT10Q9H9A5 744 aaKnown RBP3.46□□□□□ -1.86
MCF2-202ENST00000370573 POPDC3Q9HBV1 291 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 SARS2Q9NP81 518 aaKnown RBP3.46□□□□□ -1.86
MCF2-202ENST00000370573 TMEM160Q9NX00 188 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 TAS2R13Q9NYV9 303 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 DCDC2Q9UHG0 476 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 CROTQ9UKG9 612 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 ADAM21Q9UKJ8 722 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 GPR34Q9UPC5 381 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 OR1A2Q9Y585 309 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 SLCO1B1Q9Y6L6 691 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 ZDBF2Q9HCK1 2354 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 ABCA7Q8IZY2 2146 aa3.46□□□□□ -1.86
MCF2-202ENST00000370573 WDR87Q6ZQQ6 2873 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 KNL1Q8NG31 2342 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 WDR91A4D1P6 747 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 TMEM221A6NGB7 291 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 OR2AG2A6NM03 316 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 G3V2L1 256 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 M0R296 226 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 CDC7O00311 574 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 ZBTB14O43829 449 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 NOBOXO60393 691 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 PLOD3O60568 738 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 GLRA3O75311 464 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 VPS26AO75436 327 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 CDK14O94921 469 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 FSBPO95073 299 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 ZWINTO95229 277 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 ANXA2P07355 339 aaKnown RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 LTA4HP09960 611 aaKnown RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 CD1DP15813 335 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 ZNF37AP17032 561 aaPredicted RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 ZNF8P17098 575 aaPredicted RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 AOC1P19801 751 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 BCKDHBP21953 392 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 CD6P30203 668 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 OXTRP30559 389 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 KRT20P35900 424 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 SLC26A3P40879 764 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 SKIV2L2P42285 1042 aaKnown RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 GLRBP48167 497 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 SLC12A2P55011 1212 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 SOX8P57073 446 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 PLP2Q04941 152 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 ILF2Q12905 390 aaKnown RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 OR4D1Q15615 310 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 TAF1BQ53T94 588 aaPredicted RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 HHATQ5VTY9 493 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 DOK6Q6PKX4 331 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 GCNT7Q6ZNI0 430 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 ISCA2Q86U28 154 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 FAM90A1Q86YD7 464 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 VRK3Q8IV63 474 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 CPNE9Q8IYJ1 553 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 MAML2Q8IZL2 1156 aaPredicted RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 FSTL5Q8N475 847 aaPredicted RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 LILRA3Q8N6C8 439 aaPredicted RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 ARFGAP2Q8N6H7 521 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 DCBLD1Q8N8Z6 715 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 CKAP2Q8WWK9 683 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 BIRC7Q96CA5 298 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 FAM210AQ96ND0 272 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 UHRF1Q96T88 793 aaPredicted RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 PAIP2Q9BPZ3 127 aaKnown RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 CCM2Q9BSQ5 444 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 APOOQ9BUR5 198 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 MECRQ9BV79 373 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 DPH1Q9BZG8 443 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 CCDC68Q9H2F9 335 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 LDAHQ9H6V9 325 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 NMRAL1Q9HBL8 299 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 TM7SF3Q9NS93 570 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 SPATS2LQ9NUQ6 558 aaKnown RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 TBC1D23Q9NUY8 699 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 INTS9Q9NV88 658 aaKnown RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 KCTD5Q9NXV2 234 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 NKIRAS1Q9NYS0 192 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 CPSF2Q9P2I0 782 aaKnown RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 SLC23A2Q9UGH3 650 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 TRMT6Q9UJA5 497 aaKnown RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 GNPTGQ9UJJ9 305 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 SLC13A4Q9UKG4 626 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 CDYLQ9Y232 598 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 PLEKHM1Q9Y4G2 1056 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 MAGED1Q9Y5V3 778 aaPredicted RBP3.45□□□□□ -1.86
MCF2-202ENST00000370573 EML5Q05BV3 1969 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 PGPEP1LA6NFU8 196 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 NEMP2A6NFY4 417 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 PRSS29PA6NIE9 313 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 E5RI56 91 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 F2RL2O00254 374 aa3.45□□□□□ -1.86
MCF2-202ENST00000370573 BTN3A1O00481 513 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms