RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 NFKBIDQ8NI38 313 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 SNIP1Q8TAD8 396 aaKnown RBP15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 MOAP1Q96BY2 351 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 KCNC2Q96PR1 638 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 TUBGCP5Q96RT8 1024 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 ZNF700Q9H0M5 742 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 PCDHGA2Q9Y5H1 932 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 GRID2O43424 1007 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 CLDN7O95471 211 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 ZNF35P13682 527 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 IRF2P14316 349 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 MAGEA2P43356 314 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 AP2S1P53680 142 aaPredicted RBP15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 ROR2Q01974 943 aaKnown RBP15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 STRA6Q9BX79 667 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 OR8D2Q9GZM6 311 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 EBF3Q9H4W6 596 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 CCDC86Q9H6F5 360 aaKnown RBP15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 ERCC1P07992 297 aaPredicted RBP15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 FMO3P31513 532 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 CCNHP51946 323 aaPredicted RBP15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 RAB8AP61006 207 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 OR4F3Q6IEY1 312 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 DRICH1Q6PGQ1 229 aaPredicted RBP15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 UNQ6126/PRO20091Q6UXV3 157 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 THAP6Q8TBB0 222 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 CDKN2AIPNLQ96HQ2 116 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 PRTFDC1Q9NRG1 225 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 LAMP5Q9UJQ1 280 aa15.25■□□□□ 0.03
NUCKS1-201ENST00000367142 A0A0U1RQF3 1178 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 SOX1O00570 391 aaPredicted RBP15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 PFKLP17858 780 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 FBLP22087 321 aaKnown RBP15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 EIF5AL1Q6IS14 154 aaKnown RBP15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 C12orf42Q96LP6 360 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 PARPBPQ9NWS1 579 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 RBPJLQ9UBG7 517 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 PLCL2Q9UPR0 1127 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 TTLL8A6PVC2 850 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 PREPP48147 710 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 RPS3AP61247 264 aaKnown RBP15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 KCNC3Q14003 757 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 ARL9Q6T311 187 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 ZNF283Q8N7M2 679 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 ZNF709Q8N972 641 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 OR10A4Q9H209 315 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 TRNAU1APQ9NX07 287 aaKnown RBP15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 GPR34Q9UPC5 381 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 PCDHB14Q9Y5E9 798 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 TCRBV7S2A1N4TA0A589 114 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 J3QLW9 94 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 ABLIM1O14639 778 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 GALTP07902 379 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 SLC2A2P11168 524 aaPredicted RBP15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 ZNF19P17023 458 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 IRF9Q00978 393 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 OR9A1PQ8NGU1 263 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 POF1BQ8WVV4 589 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 PPP1R14BQ96C90 147 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 MAPKAP1Q9BPZ7 522 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 PLAGL1Q9UM63 463 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 A0A1B0GVT2 93 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 MANBAO00462 879 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 BMP6P22004 513 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 HMGCS1Q01581 520 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 GRIK2Q13002 908 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 TPRG1LQ5T0D9 272 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 OGFRL1Q5TC84 451 aaPredicted RBP15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 ZIM2Q9NZV7 527 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 ZFR2Q9UPR6 939 aaKnown RBP15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 PCDHGA10Q9Y5H3 936 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 BACE2Q9Y5Z0 518 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 CIB4A0PJX0 185 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 TNFRSF25Q93038 417 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 PCDHGA6Q9Y5G7 932 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 MAN2B1O00754 1011 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 DUX1O43812 170 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 SOD2P04179 222 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 HAPLN1P10915 354 aaPredicted RBP15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 POLR2CP19387 275 aaPredicted RBP15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 S100A2P29034 98 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 SPATC1Q76KD6 591 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 CMTM8Q8IZV2 173 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 MMABQ96EY8 250 aaPredicted RBP15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 C12orf65Q9H3J6 166 aaKnown RBP15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 HS3ST4Q9Y661 456 aa15.24■□□□□ 0.03
NUCKS1-201ENST00000367142 VNN2O95498 520 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 C8orf89P0DMQ9 161 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 TAS2R43P59537 309 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 CDK6Q00534 326 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 SEMA3AQ14563 771 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 CEACAM20Q6UY09 585 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 PKP4Q99569 1192 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 G6PC3Q9BUM1 346 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 SLC22A4Q9H015 551 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 SMOC2Q9H3U7 446 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 GIN1Q9NXP7 522 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 SH3PXD2BA1X283 911 aa15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 KLF1Q13351 362 aaPredicted RBP15.23■□□□□ 0.03
NUCKS1-201ENST00000367142 PITRM1Q5JRX3 1037 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms