RNA–Protein interactions for RNA: ENST00000366159.8

TNFRSF1A-202, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,339 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-202ENST00000366159 DOPEY1Q5JWR5 2465 aa12.93□□□□□ -0.34
TNFRSF1A-202ENST00000366159 EFCAB8A8MWE9 144 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 AGFG2O95081 481 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 WISP3O95389 354 aaPredicted RBP12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 CELA2AP08217 269 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 IL1RNP18510 177 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 CXCR2P25025 360 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 EEF1A2Q05639 463 aaKnown RBP12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 TLR1Q15399 786 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 IRAK1BP1Q5VVH5 260 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 FAAH2Q6GMR7 532 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 LINC00696Q6ZRV3 163 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 ASPGQ86U10 573 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 CPAMD8Q8IZJ3 1885 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 ZNF740Q8NDX6 193 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 CATSPER1Q8NEC5 780 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 OR51Q1Q8NH59 317 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 BRIX1Q8TDN6 353 aaKnown RBP12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 SSC4DQ8WTU2 575 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 ANKRD49Q8WVL7 239 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 ATL1Q8WXF7 558 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 HAS2Q92819 552 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 NEIL2Q969S2 332 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 MOCOSQ96EN8 888 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 KRT12Q99456 494 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 TRIM31Q9BZY9 425 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 SPNS1Q9H2V7 528 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 SMYD2Q9NRG4 433 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 RIC8BQ9NVN3 520 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 ZFATQ9P243 1243 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 UNC79Q9P2D8 2635 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 CNTRLQ7Z7A1 2325 aa12.92□□□□□ -0.34
TNFRSF1A-202ENST00000366159 TRBC2A0A5B9 178 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 OR2W5A6NFC9 320 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 SGK494L7N484 410 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 CDC7O00311 574 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 E2F3O00716 465 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 GUCA1CO95843 209 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 C1QAP02745 245 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 C8orf89P0DMQ9 161 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 CCR8P51685 355 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 TAS2R39P59534 338 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 CDKL1Q00532 357 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 MEF2AQ02078 507 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 PWP1Q13610 501 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 CATSPEREQ5SY80 951 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 ZNF324BQ6AW86 544 aaPredicted RBP12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 CYS1Q717R9 158 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 CEP97Q8IW35 865 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 NKAPQ8N5F7 415 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 ST6GALNAC3Q8NDV1 305 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 PRR7Q8TB68 274 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 ALKBH8Q96BT7 664 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 TUBB6Q9BUF5 446 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 TRIM54Q9BYV2 358 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 MAP10Q9P2G4 905 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 NAALAD2Q9Y3Q0 740 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 POLEQ07864 2286 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 ICE1Q9Y2F5 2266 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 SPTBN1Q01082 2364 aaKnown RBP12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 SCN3AQ9NY46 2000 aa12.91□□□□□ -0.34
TNFRSF1A-202ENST00000366159 FAM95CA0A1B0GW59 222 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 CTAGE15A4D2H0 777 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 ANKUB1A6NFN9 424 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 FAM187AA6NFU0 413 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 DNAJB6O75190 326 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 SLC35G6P0C7Q6 338 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 SMIM10L1P0DMW3 83 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 ITGAMP11215 1152 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 ICAM2P13598 275 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 IL10P22301 178 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 GRK3P35626 688 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 XCR1P46094 333 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 SCTRP47872 440 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 TNFSF10P50591 281 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 MRPS25P82663 173 aaKnown RBP12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 RHAGQ02094 409 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 HYAL2Q12891 473 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 ZNF460Q14592 562 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 H3F3CQ6NXT2 135 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 LANCL3Q6ZV70 420 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 CPEB2Q7Z5Q1 589 aaKnown RBP12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 CTAGE6Q86UF2 777 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 KLHDC8AQ8IYD2 350 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 ZBED8Q8IZ13 594 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 SIRT6Q8N6T7 355 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 ANKRD53Q8N9V6 530 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 BBOF1Q8ND07 529 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 PLPP5Q8NEB5 264 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 SPATA4Q8NEY3 305 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 NT5CQ8TCD5 201 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 GRHL3Q8TE85 626 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 FAR1Q8WVX9 515 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 SLC5A11Q8WWX8 675 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 SMIM10Q96HG1 83 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 ERP44Q9BS26 406 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 RNF32Q9H0A6 362 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 RHOJQ9H4E5 214 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 POPDC3Q9HBV1 291 aa12.9□□□□□ -0.34
TNFRSF1A-202ENST00000366159 ANKHQ9HCJ1 492 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms