RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 RHBDD2Q6NTF9 364 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 VN1R4Q7Z5H5 301 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 NUDCD3Q8IVD9 361 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 KIRREL3Q8IZU9 778 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 OR4N4Q8N0Y3 316 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 CSNK1A1LQ8N752 337 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 CCNYL1Q8N7R7 359 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 ANKRD53Q8N9V6 530 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 ZNF740Q8NDX6 193 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 OR52B6Q8NGF0 335 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 OR6Y1Q8NGX8 325 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 RAB3IL1Q8TBN0 382 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 NT5CQ8TCD5 201 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 TRPC4APQ8TEL6 797 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 GATA6Q92908 595 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 MVB12AQ96EY5 273 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 NSUN5Q96P11 429 aaKnown RBP13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 CTRCQ99895 268 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 NDC1Q9BTX1 674 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 GATA5Q9BWX5 397 aaPredicted RBP13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 SLC29A3Q9BZD2 475 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 ULBP3Q9BZM4 244 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 EML4Q9HC35 981 aaKnown RBP13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 IRAK4Q9NWZ3 460 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 TRPS1Q9UHF7 1281 aa13.2□□□□□ -0.3
NSMCE1-201ENST00000361439 ADAMTS20P59510 1910 aa13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 HYKKA2RU49 373 aa13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 PMS2P1A4D2B8 440 aa13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 FOXE1O00358 373 aaPredicted RBP13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 ZNF749O43361 778 aa13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 STK17BO94768 372 aa13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 DLGAP3O95886 979 aa13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 ARFIP1P53367 373 aa13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 CDH13P55290 713 aa13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 STXBP1P61764 594 aaKnown RBP13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 SKP1P63208 163 aa13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 PHEXP78562 749 aa13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 MEF2AQ02078 507 aaPredicted RBP13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 RBBP5Q15291 538 aaKnown RBP13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 GPRIN3Q6ZVF9 776 aa13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 PLD3Q8IV08 490 aa13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 TRIM42Q8IWZ5 723 aa13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 ESX1Q8N693 406 aa13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 OR7G3Q8NG95 312 aa13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 FGF11Q92914 225 aa13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 SPRTNQ9H040 489 aaPredicted RBP13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 SPNS1Q9H2V7 528 aa13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 ACTR5Q9H9F9 607 aaPredicted RBP13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 ZNF490Q9ULM2 529 aaPredicted RBP13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 SLC22A7Q9Y694 548 aa13.19□□□□□ -0.3
NSMCE1-201ENST00000361439 WDFY3Q8IZQ1 3526 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 TMEM8BA6NDV4 472 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 AGRPO00253 132 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 NDUFS4O43181 175 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 KIAA0754O94854 1291 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 ONECUT2O95948 504 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 SERPINE1P05121 402 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 EIF2S1P05198 315 aaKnown RBP13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 KLK3P07288 261 aaPredicted RBP13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 ARL1P40616 181 aaPredicted RBP13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 PPP2R2AP63151 447 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 RCN2Q14257 317 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 HERC3Q15034 1050 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 ADPRMQ3LIE5 342 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 TMEM214Q6NUQ4 689 aaKnown RBP13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 PRMT9Q6P2P2 845 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 C6orf15Q6UXA7 325 aaPredicted RBP13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 ZNF517Q6ZMY9 492 aaPredicted RBP13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 ABHD13Q7L211 337 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 MYLK4Q86YV6 388 aaPredicted RBP13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 ARHGEF39Q8N4T4 335 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 SRFBP1Q8NEF9 429 aaKnown RBP13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 OR4F6Q8NGB9 312 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 PPP1R14CQ8TAE6 165 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 WDR20Q8TBZ3 569 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 CREB3L4Q8TEY5 395 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 AGAP11Q8TF27 550 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 PMEPA1Q969W9 287 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 ZBTB9Q96C00 473 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 C17orf62Q9BQA9 187 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 MECRQ9BV79 373 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 SLC7A5P2Q9GIP4 190 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 SLC6A16Q9GZN6 736 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 CCDC86Q9H6F5 360 aaKnown RBP13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 CLK4Q9HAZ1 481 aaKnown RBP13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 CUTCQ9NTM9 273 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 FOXJ2Q9P0K8 574 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 ZNF225Q9UK10 706 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 CDC14AQ9UNH5 594 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 SNX6Q9UNH7 406 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 RUVBL1Q9Y265 456 aaKnown RBP13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 RNF11Q9Y3C5 154 aa13.18□□□□□ -0.3
NSMCE1-201ENST00000361439 A0A1B0GX78 115 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 LRIT2A6NDA9 550 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 TMEM114B3SHH9 223 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 DSCR3O14972 297 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 TIAF1O95411 115 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 KRT6AP02538 564 aa13.17□□□□□ -0.3
NSMCE1-201ENST00000361439 KRT6BP04259 564 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms