RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 UBXN10Q96LJ8 280 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 ITPAQ9BY32 194 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 PLAGL1Q9UM63 463 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 INSL6Q9Y581 213 aa15.82■□□□□ 0.12
SCAF1-201ENST00000360565 ALDOCP09972 364 aaKnown RBP15.81■□□□□ 0.12
SCAF1-201ENST00000360565 CD70P32970 193 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 PIK3CBP42338 1070 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 ERVK-21P61565 698 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 MYBPC1Q00872 1141 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 SCN1BQ07699 218 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 LRRC32Q14392 662 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 TP53INP1Q96A56 240 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 RGMAQ96B86 450 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 ANKRD60Q9BZ19 345 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 GNRH1P01148 92 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 AVPR1BP47901 424 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 STXBP1P61764 594 aaKnown RBP15.81■□□□□ 0.12
SCAF1-201ENST00000360565 PCDH1Q08174 1060 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 C2orf27AQ580R0 203 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 CLEC12AQ5QGZ9 265 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 LIPJQ5W064 366 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 ADGRG5Q8IZF4 528 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 TMEM145Q8NBT3 493 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 SLC39A13Q96H72 371 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 CLEC4MQ9H2X3 399 aaPredicted RBP15.81■□□□□ 0.12
SCAF1-201ENST00000360565 MARCH7Q9H992 704 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 TMEM27Q9HBJ8 222 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 CALML5Q9NZT1 146 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 POLR1DQ9Y2S0 133 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 SPIN1Q9Y657 262 aaPredicted RBP15.81■□□□□ 0.12
SCAF1-201ENST00000360565 GTPBP1O00178 669 aaKnown RBP15.81■□□□□ 0.12
SCAF1-201ENST00000360565 ATXN1LP0C7T5 689 aaKnown RBP15.81■□□□□ 0.12
SCAF1-201ENST00000360565 RCAN2Q14206 197 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 GK3PQ14409 553 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 PCBP2Q15366 365 aaKnown RBP eCLIP15.81■□□□□ 0.122e-7■■■■■ 34.9
SCAF1-201ENST00000360565 ZNF630Q2M218 657 aaPredicted RBP15.81■□□□□ 0.12
SCAF1-201ENST00000360565 ANKLE1Q8NAG6 615 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 FLCNQ8NFG4 579 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 C9orf43Q8TAL5 461 aaPredicted RBP15.81■□□□□ 0.12
SCAF1-201ENST00000360565 TMEM203Q969S6 136 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 ALPK1Q96QP1 1244 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 FAM118AQ9NWS6 357 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 MRPL39Q9NYK5 338 aaKnown RBP15.81■□□□□ 0.12
SCAF1-201ENST00000360565 CFL2Q9Y281 166 aa15.81■□□□□ 0.12
SCAF1-201ENST00000360565 CPSF4LA6NMK7 179 aaKnown RBP15.8■□□□□ 0.12
SCAF1-201ENST00000360565 PRMT3O60678 531 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 IFNGP01579 166 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 GGT1P19440 569 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 CSNK2A2P19784 350 aaPredicted RBP15.8■□□□□ 0.12
SCAF1-201ENST00000360565 MYF6P23409 242 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 XKR4Q5GH76 650 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 GJD3Q8N144 294 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 CEP295NLQ96MC4 621 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 VAPAQ9P0L0 249 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 HCSTQ9UBK5 93 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 MAP1BP46821 2468 aaKnown RBP15.8■□□□□ 0.12
SCAF1-201ENST00000360565 TLR4O00206 839 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 TIE1P35590 1138 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 KHKP50053 298 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 ZNF140P52738 457 aaPredicted RBP15.8■□□□□ 0.12
SCAF1-201ENST00000360565 PDGFRLQ15198 375 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 ATAT1Q5SQI0 421 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 RFKQ969G6 155 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 REEP4Q9H6H4 257 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 CREBZFQ9NS37 354 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 GPR45Q9Y5Y3 372 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 ATP6V1G1O75348 118 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 CPN2P22792 545 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 LGALS3BPQ08380 585 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 ILF3Q12906 894 aaKnown RBP eCLIP15.8■□□□□ 0.124e-8■■□□□ 13.4
SCAF1-201ENST00000360565 RETREG3Q86VR2 466 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 PEX5LQ8IYB4 626 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 CADM2Q8N3J6 435 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 SCRN2Q96FV2 425 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 OR51V1Q9H2C8 321 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 P2RX2Q9UBL9 471 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 FBP2O00757 339 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 GNAO1P09471 354 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 JUPP14923 745 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 MAP2K4P45985 399 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 TMBIM6P55061 237 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 RPS3AP61247 264 aaKnown RBP15.8■□□□□ 0.12
SCAF1-201ENST00000360565 C5orf22Q49AR2 442 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 TMCO2Q7Z6W1 182 aaPredicted RBP15.8■□□□□ 0.12
SCAF1-201ENST00000360565 VTCN1Q7Z7D3 282 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 CHCHD4Q8N4Q1 142 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 KLHDC9Q8NEP7 349 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 TRIB3Q96RU7 358 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 MIR1-1HGQ9H1L0 117 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 TMEM165Q9HC07 324 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 MSRAQ9UJ68 235 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 HCN4Q9Y3Q4 1203 aa15.8■□□□□ 0.12
SCAF1-201ENST00000360565 ECM29Q5VYK3 1845 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 LRRC72A6NJI9 287 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 CHST10O43529 356 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 SDC2P34741 201 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 MPIP34949 423 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 RPP38P78345 283 aaKnown RBP15.79■□□□□ 0.12
SCAF1-201ENST00000360565 NDUFAF6Q330K2 333 aa15.79■□□□□ 0.12
SCAF1-201ENST00000360565 ZFP69Q49AA0 526 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms