RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 IL1R2P27930 398 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 RGS19P49795 217 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 TMEM156Q8N614 296 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 METTL27Q8N6F8 245 aaPredicted RBP17.85■□□□□ 0.45
SHANK1-202ENST00000359082 PYURFQ96I23 114 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 CGREF1Q99674 301 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 OSBPL7Q9BZF2 842 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 CARD8Q9Y2G2 431 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 IFNA7P01567 189 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 ZBTB48P10074 688 aaPredicted RBP17.85■□□□□ 0.45
SHANK1-202ENST00000359082 GADD45AP24522 165 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 ZNF41P51814 821 aaPredicted RBP17.85■□□□□ 0.45
SHANK1-202ENST00000359082 IST1P53990 364 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 CCL14Q16627 93 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 FAM76BQ5HYJ3 339 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 TXNDC8Q6A555 127 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 OR2T5Q6IEZ7 315 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 ADGRD2Q7Z7M1 963 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 OR2T29Q8NH02 315 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 PNPLA2Q96AD5 504 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 TUBGCP5Q96RT8 1024 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 SLC5A7Q9GZV3 580 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 USP29Q9HBJ7 922 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 CHRM1P11229 460 aaPredicted RBP17.85■□□□□ 0.45
SHANK1-202ENST00000359082 CLRN1P58418 232 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 PDGFRLQ15198 375 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 DECR1Q16698 335 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 RPS27LQ71UM5 84 aaKnown RBP17.85■□□□□ 0.45
SHANK1-202ENST00000359082 SLC37A3Q8NCC5 494 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 HSH2DQ96JZ2 352 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 NUDT15Q9NV35 164 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 ABCG2Q9UNQ0 655 aa17.85■□□□□ 0.45
SHANK1-202ENST00000359082 PCSK2P16519 638 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 RAB39AQ14964 217 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 BPIFB1Q8TDL5 484 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 OR51I1Q9H343 314 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 GSKIPQ9P0R6 139 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 TIMM8BQ9Y5J9 83 aaPredicted RBP17.84■□□□□ 0.45
SHANK1-202ENST00000359082 LDB2O43679 373 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 C6orf47O95873 294 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 HTR1AP08908 422 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 ALG10Q5BKT4 473 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 MFSD2AQ8NA29 543 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 CAPNS2Q96L46 248 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 WACQ9BTA9 647 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 EFCAB11Q9BUY7 163 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 YIPF1Q9Y548 306 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 PCDHB11Q9Y5F2 797 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 TEX13DA0A0J9YY54 714 aaPredicted RBP17.84■□□□□ 0.45
SHANK1-202ENST00000359082 AQP12BA6NM10 295 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 SRPRAP08240 638 aaKnown RBP17.84■□□□□ 0.45
SHANK1-202ENST00000359082 GDF5P43026 501 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 NR0B1P51843 470 aaKnown RBP17.84■□□□□ 0.45
SHANK1-202ENST00000359082 OLIG2Q13516 323 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 TMEM164Q5U3C3 297 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 TPGS2Q68CL5 300 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 FBXL22Q6P050 247 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 SLC22A16Q86VW1 577 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 AQP12AQ8IXF9 295 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 ZNF599Q96NL3 588 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 SIX2Q9NPC8 291 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 WASF3Q9UPY6 502 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 BNIP3Q12983 259 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 LRP8Q14114 963 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 GRK1Q15835 563 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 ZNF516Q92618 1163 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 SPEF1Q9Y4P9 236 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 HS3ST4Q9Y661 456 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 AGPSO00116 658 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 TLX2O43763 284 aaPredicted RBP17.84■□□□□ 0.45
SHANK1-202ENST00000359082 RAB36O95755 333 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 XRCC1P18887 633 aaPredicted RBP17.84■□□□□ 0.45
SHANK1-202ENST00000359082 NIPA2Q8N8Q9 360 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 CDKN2AIPNLQ96HQ2 116 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 Q9N2J8 555 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 RNF11Q9Y3C5 154 aa17.84■□□□□ 0.45
SHANK1-202ENST00000359082 CBSLP0DN79 551 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 CBSP35520 551 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 CDK6Q00534 326 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 MYLK3Q32MK0 819 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 TMEM80Q96HE8 168 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 PIGVQ9NUD9 493 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 ZIM2Q9NZV7 527 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 LAMP5Q9UJQ1 280 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 KCNK6Q9Y257 313 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 EDDM13A0A1B0GTR0 161 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 GP1BBP13224 206 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 FPGSQ05932 587 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 TRIM74Q86UV6 250 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 TRIM73Q86UV7 250 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 SPAG16Q8N0X2 631 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 BORCS8Q96FH0 119 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 FUZQ9BT04 418 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 ITM2CQ9NQX7 267 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 GALPQ9UBC7 116 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 CFL2Q9Y281 166 aa17.83■□□□□ 0.45
SHANK1-202ENST00000359082 A0A1W2PQ45 241 aaPredicted RBP17.83■□□□□ 0.44
SHANK1-202ENST00000359082 A0A1W2PQY0 241 aa17.83■□□□□ 0.44
SHANK1-202ENST00000359082 HTR3EA5X5Y0 456 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms