RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 TEX12Q9BXU0 123 aa8.82□□□□□ -1
UPF2-202ENST00000357604 IGSF5Q9NSI5 407 aa8.82□□□□□ -1
UPF2-202ENST00000357604 UCKL1Q9NWZ5 548 aa8.82□□□□□ -1
UPF2-202ENST00000357604 KLHL28Q9NXS3 571 aa8.82□□□□□ -1
UPF2-202ENST00000357604 SLC17A6Q9P2U8 582 aa8.82□□□□□ -1
UPF2-202ENST00000357604 CNOT6Q9ULM6 557 aaKnown RBP8.82□□□□□ -1
UPF2-202ENST00000357604 TRIM38O00635 465 aa8.82□□□□□ -1
UPF2-202ENST00000357604 E2F3O00716 465 aa8.82□□□□□ -1
UPF2-202ENST00000357604 DSCR3O14972 297 aa8.82□□□□□ -1
UPF2-202ENST00000357604 PCDH7O60245 1069 aa8.82□□□□□ -1
UPF2-202ENST00000357604 ANKRD34CP0C6C1 535 aa8.82□□□□□ -1
UPF2-202ENST00000357604 DRD2P14416 443 aa8.82□□□□□ -1
UPF2-202ENST00000357604 PLA2G16P53816 162 aa8.82□□□□□ -1
UPF2-202ENST00000357604 PRR5P85299 388 aa8.82□□□□□ -1
UPF2-202ENST00000357604 TCF15Q12870 199 aa8.82□□□□□ -1
UPF2-202ENST00000357604 KRT72Q14CN4 511 aa8.82□□□□□ -1
UPF2-202ENST00000357604 SMU1Q2TAY7 513 aa8.82□□□□□ -1
UPF2-202ENST00000357604 CHMP1BQ7LBR1 199 aa8.82□□□□□ -1
UPF2-202ENST00000357604 BANPQ8N9N5 519 aa8.82□□□□□ -1
UPF2-202ENST00000357604 RSC1A1Q92681 617 aa8.82□□□□□ -1
UPF2-202ENST00000357604 ITCHQ96J02 903 aa8.82□□□□□ -1
UPF2-202ENST00000357604 ZNF778Q96MU6 729 aa8.82□□□□□ -1
UPF2-202ENST00000357604 ZNF768Q9H5H4 540 aaKnown RBP8.82□□□□□ -1
UPF2-202ENST00000357604 CD93Q9NPY3 652 aa8.82□□□□□ -1
UPF2-202ENST00000357604 FGF21Q9NSA1 209 aa8.82□□□□□ -1
UPF2-202ENST00000357604 TMEM74BQ9NUR3 256 aa8.82□□□□□ -1
UPF2-202ENST00000357604 THUMPD1Q9NXG2 353 aaKnown RBP8.82□□□□□ -1
UPF2-202ENST00000357604 MMACHCQ9Y4U1 282 aa8.82□□□□□ -1
UPF2-202ENST00000357604 C1orf226A1L170 272 aa8.82□□□□□ -1
UPF2-202ENST00000357604 EME2A4GXA9 379 aaPredicted RBP8.82□□□□□ -1
UPF2-202ENST00000357604 GMNCA6NCL1 334 aa8.82□□□□□ -1
UPF2-202ENST00000357604 TTC36A6NLP5 189 aa8.82□□□□□ -1
UPF2-202ENST00000357604 TP53I11O14683 189 aa8.82□□□□□ -1
UPF2-202ENST00000357604 DLSTP36957 453 aa8.82□□□□□ -1
UPF2-202ENST00000357604 TSFMP43897 325 aaKnown RBP8.82□□□□□ -1
UPF2-202ENST00000357604 SPATA21Q7Z572 469 aa8.82□□□□□ -1
UPF2-202ENST00000357604 OR4A15Q8NGL6 344 aa8.82□□□□□ -1
UPF2-202ENST00000357604 DNAJB8Q8NHS0 232 aa8.82□□□□□ -1
UPF2-202ENST00000357604 BAHD1Q8TBE0 780 aaPredicted RBP8.82□□□□□ -1
UPF2-202ENST00000357604 LRRC46Q96FV0 321 aa8.82□□□□□ -1
UPF2-202ENST00000357604 BIRC8Q96P09 236 aa8.82□□□□□ -1
UPF2-202ENST00000357604 CCDC154A6NI56 674 aa8.81□□□□□ -1
UPF2-202ENST00000357604 ERN1O75460 977 aaKnown RBP8.81□□□□□ -1
UPF2-202ENST00000357604 OR4F21O95013 312 aa8.81□□□□□ -1
UPF2-202ENST00000357604 SERPINA6P08185 405 aa8.81□□□□□ -1
UPF2-202ENST00000357604 EMP2P54851 167 aa8.81□□□□□ -1
UPF2-202ENST00000357604 C2orf80Q0P641 193 aa8.81□□□□□ -1
UPF2-202ENST00000357604 C6orf10Q5SRN2 563 aa8.81□□□□□ -1
UPF2-202ENST00000357604 ZNF678Q5SXM1 525 aa8.81□□□□□ -1
UPF2-202ENST00000357604 SLC5A8Q8N695 610 aa8.81□□□□□ -1
UPF2-202ENST00000357604 PDPRQ8NCN5 879 aa8.81□□□□□ -1
UPF2-202ENST00000357604 L3HYPDHQ96EM0 354 aa8.81□□□□□ -1
UPF2-202ENST00000357604 C19orf60Q96EN9 201 aa8.81□□□□□ -1
UPF2-202ENST00000357604 ZBED6CLQ96FA7 236 aaPredicted RBP8.81□□□□□ -1
UPF2-202ENST00000357604 MAP3K3Q99759 626 aa8.81□□□□□ -1
UPF2-202ENST00000357604 YY1AP1Q9H869 796 aa8.81□□□□□ -1
UPF2-202ENST00000357604 FANCFQ9NPI8 374 aa8.81□□□□□ -1
UPF2-202ENST00000357604 TCF7L2Q9NQB0 619 aa8.81□□□□□ -1
UPF2-202ENST00000357604 POLHQ9Y253 713 aa8.81□□□□□ -1
UPF2-202ENST00000357604 ERAL1O75616 437 aaKnown RBP8.81□□□□□ -1
UPF2-202ENST00000357604 SLC16A8O95907 504 aa8.81□□□□□ -1
UPF2-202ENST00000357604 CAPN1P07384 714 aa8.81□□□□□ -1
UPF2-202ENST00000357604 CSNK2A2P19784 350 aaPredicted RBP8.81□□□□□ -1
UPF2-202ENST00000357604 SLC19A1P41440 591 aa8.81□□□□□ -1
UPF2-202ENST00000357604 PLGLB1Q02325 96 aa8.81□□□□□ -1
UPF2-202ENST00000357604 NAA30Q147X3 362 aaPredicted RBP8.81□□□□□ -1
UPF2-202ENST00000357604 LMNTD1Q8N9Z9 388 aa8.81□□□□□ -1
UPF2-202ENST00000357604 OR56A3Q8NH54 315 aa8.81□□□□□ -1
UPF2-202ENST00000357604 LZICQ8WZA0 190 aa8.81□□□□□ -1
UPF2-202ENST00000357604 CRB3Q9BUF7 120 aa8.81□□□□□ -1
UPF2-202ENST00000357604 CCDC28BQ9BUN5 200 aa8.81□□□□□ -1
UPF2-202ENST00000357604 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.81□□□□□ -1
UPF2-202ENST00000357604 ADAM29Q9UKF5 820 aa8.81□□□□□ -1
UPF2-202ENST00000357604 SATB2Q9UPW6 733 aa8.81□□□□□ -1
UPF2-202ENST00000357604 KCNH1O95259 989 aa8.81□□□□□ -1
UPF2-202ENST00000357604 PROCP04070 461 aa8.81□□□□□ -1
UPF2-202ENST00000357604 ACPPP15309 386 aa8.81□□□□□ -1
UPF2-202ENST00000357604 ENDOUP21128 410 aaKnown RBP8.81□□□□□ -1
UPF2-202ENST00000357604 SLC18A1P54219 525 aa8.81□□□□□ -1
UPF2-202ENST00000357604 TMPRSS3P57727 454 aa8.81□□□□□ -1
UPF2-202ENST00000357604 PTPRRQ15256 657 aa8.81□□□□□ -1
UPF2-202ENST00000357604 EXT1Q16394 746 aa8.81□□□□□ -1
UPF2-202ENST00000357604 PYCR2Q96C36 320 aa8.81□□□□□ -1
UPF2-202ENST00000357604 MAGED4Q96JG8 741 aa8.81□□□□□ -1
UPF2-202ENST00000357604 GORASP1Q9BQQ3 440 aa8.81□□□□□ -1
UPF2-202ENST00000357604 B4GALT7Q9UBV7 327 aa8.81□□□□□ -1
UPF2-202ENST00000357604 ATXN7L1Q9ULK2 861 aaPredicted RBP8.81□□□□□ -1
UPF2-202ENST00000357604 TMED10P49755 219 aaKnown RBP8.81□□□□□ -1
UPF2-202ENST00000357604 MANFP55145 182 aaKnown RBP8.81□□□□□ -1
UPF2-202ENST00000357604 SLC18A2Q05940 514 aa8.81□□□□□ -1
UPF2-202ENST00000357604 RFTN2Q52LD8 501 aaPredicted RBP8.81□□□□□ -1
UPF2-202ENST00000357604 CHCHD2P9Q5T1J5 151 aaPredicted RBP8.81□□□□□ -1
UPF2-202ENST00000357604 CCDC81Q6ZN84 652 aa8.81□□□□□ -1
UPF2-202ENST00000357604 CEP97Q8IW35 865 aa8.81□□□□□ -1
UPF2-202ENST00000357604 NAGSQ8N159 534 aa8.81□□□□□ -1
UPF2-202ENST00000357604 OR2L5Q8NG80 312 aa8.81□□□□□ -1
UPF2-202ENST00000357604 OR2I1PQ8NGU4 316 aa8.81□□□□□ -1
UPF2-202ENST00000357604 CCL4L1Q8NHW4 92 aa8.81□□□□□ -1
UPF2-202ENST00000357604 TANKQ92844 425 aa8.81□□□□□ -1
UPF2-202ENST00000357604 B3GNT4Q9C0J1 378 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms