RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 KLKB1P03952 638 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 LCKP06239 509 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 UQCRC1P31930 480 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 PREPP48147 710 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 CPTPQ5TA50 214 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.63□□□□□ -0.23
SREBF1-202ENST00000355815 CYP2U1Q7Z449 544 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 CDK20Q8IZL9 346 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 RNF175Q8N4F7 328 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 CCDC120Q96HB5 630 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 NPLQ9BXD5 320 aaPredicted RBP13.63□□□□□ -0.23
SREBF1-202ENST00000355815 RACGAP1Q9H0H5 632 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 MUC13Q9H3R2 512 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 KCTD5Q9NXV2 234 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 ASF1AQ9Y294 204 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 CRYZL1O95825 349 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 ELFN1P0C7U0 828 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 FOSL2P15408 326 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 HNF1BP35680 557 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 EEFSECP57772 596 aaKnown RBP13.63□□□□□ -0.23
SREBF1-202ENST00000355815 CD47Q08722 323 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 AAK1Q2M2I8 961 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 RNF111Q6ZNA4 994 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 FRS2Q8WU20 508 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 KCNN1Q92952 543 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 SLC38A2Q96QD8 506 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 DSN1Q9H410 356 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 C1orf109Q9NX04 203 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 ZNF510Q9Y2H8 683 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 NRXN2Q9P2S2 1712 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.63□□□□□ -0.23
SREBF1-202ENST00000355815 SLC22A2O15244 555 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 PLATP00750 562 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 ATXN1LP0C7T5 689 aaKnown RBP13.63□□□□□ -0.23
SREBF1-202ENST00000355815 PRKACAP17612 351 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 CPN2P22792 545 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 GPR1P46091 355 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 MTAPQ13126 283 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 GPAT3Q53EU6 434 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 FAM91A1Q658Y4 838 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 ZNF655Q8N720 491 aaPredicted RBP13.63□□□□□ -0.23
SREBF1-202ENST00000355815 ARMC5Q96C12 935 aa13.63□□□□□ -0.23
SREBF1-202ENST00000355815 CCDC177Q9NQR7 707 aaPredicted RBP13.63□□□□□ -0.23
SREBF1-202ENST00000355815 MRPS23Q9Y3D9 190 aaKnown RBP13.63□□□□□ -0.23
SREBF1-202ENST00000355815 TRBV23OR9-2A0A075B6M9 112 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 ISM1B1AKI9 464 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 EPOP01588 193 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 FNTBP49356 437 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 MAB21L1Q13394 359 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 ATP13A5Q4VNC0 1218 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 OR2T5Q6IEZ7 315 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 LARP4Q71RC2 724 aaKnown RBP eCLIP13.62□□□□□ -0.233e-9■■□□□ 13.6
SREBF1-202ENST00000355815 SPATC1Q76KD6 591 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 RNF44Q7L0R7 432 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 KRT77Q7Z794 578 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 RGL4Q8IZJ4 473 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 TMEM151AQ8N4L1 468 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 OR2T29Q8NH02 315 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 GPR78Q96P69 363 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 ZDHHC7Q9NXF8 308 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 PPIEQ9UNP9 301 aaKnown RBP13.62□□□□□ -0.23
SREBF1-202ENST00000355815 ANGPT4Q9Y264 503 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 TRIM3O75382 744 aaPredicted RBP13.62□□□□□ -0.23
SREBF1-202ENST00000355815 HOXD11P31277 338 aaPredicted RBP13.62□□□□□ -0.23
SREBF1-202ENST00000355815 CSTF2P33240 577 aaKnown RBP eCLIP13.62□□□□□ -0.23
SREBF1-202ENST00000355815 RFC2P35250 354 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 CAPZA2P47755 286 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 TUBA3CQ13748 450 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 LIN54Q6MZP7 749 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 OR10G2Q8NGC3 310 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 KLK6Q92876 244 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 AP2M1Q96CW1 435 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 TEX37Q96LM6 180 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 WNK3Q9BYP7 1800 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 SLC28A2O43868 658 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 CCNDBP1O95273 360 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 ANXA4P09525 319 aaPredicted RBP13.62□□□□□ -0.23
SREBF1-202ENST00000355815 MEF2AQ02078 507 aaPredicted RBP13.62□□□□□ -0.23
SREBF1-202ENST00000355815 SERPINA13PQ6UXR4 307 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 SNX20Q7Z614 316 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 TEX47Q8TBZ9 253 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 RELTQ969Z4 430 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 MRM3Q9HC36 420 aaKnown RBP13.62□□□□□ -0.23
SREBF1-202ENST00000355815 DNAJC11Q9NVH1 559 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 RHCGQ9UBD6 479 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 KCNE2Q9Y6J6 123 aa13.62□□□□□ -0.23
SREBF1-202ENST00000355815 PRAMEF12O95522 483 aa13.61□□□□□ -0.23
SREBF1-202ENST00000355815 LRP8Q14114 963 aa13.61□□□□□ -0.23
SREBF1-202ENST00000355815 MPPE1Q53F39 396 aa13.61□□□□□ -0.23
SREBF1-202ENST00000355815 SMARCD3Q6STE5 483 aa13.61□□□□□ -0.23
SREBF1-202ENST00000355815 RFLNAQ6ZTI6 216 aa13.61□□□□□ -0.23
SREBF1-202ENST00000355815 CHST9Q7L1S5 443 aa13.61□□□□□ -0.23
SREBF1-202ENST00000355815 CXXC5Q7LFL8 322 aaKnown RBP13.61□□□□□ -0.23
SREBF1-202ENST00000355815 FAM20CQ8IXL6 584 aa13.61□□□□□ -0.23
SREBF1-202ENST00000355815 LGI4Q8N135 537 aa13.61□□□□□ -0.23
SREBF1-202ENST00000355815 C11orf65Q8NCR3 313 aa13.61□□□□□ -0.23
SREBF1-202ENST00000355815 OR5AK3PQ8NH89 298 aa13.61□□□□□ -0.23
SREBF1-202ENST00000355815 SH3YL1Q96HL8 342 aaPredicted RBP13.61□□□□□ -0.23
SREBF1-202ENST00000355815 PKP4Q99569 1192 aa13.61□□□□□ -0.23
SREBF1-202ENST00000355815 SUV39H2Q9H5I1 410 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms