RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 POPDC3Q9HBV1 291 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 PHPT1Q9NRX4 125 aaPredicted RBP12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 ABCB8Q9NUT2 735 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 C14orf166Q9Y224 244 aaKnown RBP12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 C2orf92A0A1B0GVN3 265 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 F5H0A9 414 aaPredicted RBP12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 EEF1E1O43324 174 aaKnown RBP12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 MATN4O95460 622 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 SLC35G6P0C7Q6 338 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 EBLN1P0CF75 366 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 KELP23276 732 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 FAM198BQ6UWH4 519 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 C2orf73Q8N5S3 287 aaPredicted RBP12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 PNLDC1Q8NA58 520 aaKnown RBP12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 SHKBP1Q8TBC3 707 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 CMTM7Q96FZ5 175 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 CYP2S1Q96SQ9 504 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 TAPBPLQ9BX59 468 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 CCDC86Q9H6F5 360 aaKnown RBP12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 SOX17Q9H6I2 414 aaPredicted RBP12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 LCHNA4D1U4 455 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 GPR25O00155 361 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 NIPSNAP2O75323 286 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 BCHEP06276 602 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 AKT2P31751 481 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 ANKRD54Q6NXT1 300 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 DEFB128Q7Z7B8 93 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 IFNLR1Q8IU57 520 aaPredicted RBP12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 OR13C4Q8NGS5 318 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 OR2L8Q8NGY9 312 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 MTFR1LQ9H019 292 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 PLEKHA6Q9Y2H5 1048 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 AGAP5A6NIR3 686 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 HAS3O00219 553 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 HLA-DQB2P05538 268 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 HOXD8P13378 290 aaPredicted RBP12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 TCEA1P23193 301 aaKnown RBP12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 KCNC4Q03721 635 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 LCN8Q6JVE9 175 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 POMZP3Q6PJE2 187 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 NOXA1Q86UR1 476 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 IGFN1Q86VF2 1251 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 NUDT13Q86X67 352 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 OR7D4Q8NG98 312 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 NEDD4LQ96PU5 975 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 GPR20Q99678 358 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 ABCG5Q9H222 651 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 COLEC10Q9Y6Z7 277 aa12.35□□□□□ -0.43
SYNCRIP-201ENST00000355238 TCHHQ07283 1943 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 PSMD9O00233 223 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 CBSLP0DN79 551 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 IDSP22304 550 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 CBSP35520 551 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 OPRL1P41146 370 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 PLA2G4EQ3MJ16 856 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 PLEKHN1Q494U1 663 aaPredicted RBP12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 GRHL2Q6ISB3 625 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 IGDCC3Q8IVU1 814 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 CEP97Q8IW35 865 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 TTLQ8NG68 377 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 CCDC120Q96HB5 630 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 CDKN2AIPNLQ96HQ2 116 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 TM9SF2Q99805 663 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 PRSS51A0A1B0GVH4 220 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 ZNF487B1APH4 448 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 CLDN4O14493 209 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 FANCGO15287 622 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 HOXA10P31260 410 aaPredicted RBP12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 GRIK2Q13002 908 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 MAD2L1BPQ15013 274 aaPredicted RBP12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 PON3Q15166 354 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 COQ5Q5HYK3 327 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 ATAT1Q5SQI0 421 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 PRSS48Q7RTY5 328 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 NPAS3Q8IXF0 933 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 SLC7A5P1Q8MH63 180 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 SGCDQ92629 289 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 LHPPQ9H008 270 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 GOLGA2P5Q9HBQ8 144 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 OSER1Q9NX31 292 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 ZFP37Q9Y6Q3 630 aaPredicted RBP12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 CLTCQ00610 1675 aaKnown RBP12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 SLIT3O75094 1523 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 OR51F1A6NGY5 319 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 PROM1O43490 865 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 CYB5AP00167 134 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 BMXP51813 675 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 EN1Q05925 392 aaPredicted RBP12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 ZNF33AQ06730 810 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 UGT2A3Q6UWM9 527 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 GID4Q8IVV7 300 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 POGLUT1Q8NBL1 392 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 C2CD4AQ8NCU7 369 aaPredicted RBP12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 PPTC7Q8NI37 304 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 PCED1BQ96HM7 432 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 ADAD1Q96M93 576 aaKnown RBP12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 OXCT2Q9BYC2 517 aaPredicted RBP12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 KCNH6Q9H252 994 aa12.34□□□□□ -0.43
SYNCRIP-201ENST00000355238 TMEM185BQ9H7F4 350 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms