RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 NUSAP1Q9BXS6 441 aaKnown RBP9.08□□□□□ -0.96
SMG6-202ENST00000354901 MMP27Q9H306 513 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 ACTL8Q9H568 366 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 WWOXQ9NZC7 414 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 RAPGEFL1Q9UHV5 662 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 CFL2Q9Y281 166 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 TPRKBQ9Y3C4 175 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 PCDHB14Q9Y5E9 798 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 MYO7AQ13402 2215 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 H3BNC9 293 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 INPPL1O15357 1258 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 FFAR2O15552 330 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 SEC22BO75396 215 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 CLDN11O75508 207 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 STC2O76061 302 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 PRAMEF1O95521 474 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 NTRK1P04629 796 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 PRR35P0CG20 571 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 CR2P20023 1033 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 MYL9P24844 172 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 EEFSECP57772 596 aaKnown RBP9.07□□□□□ -0.96
SMG6-202ENST00000354901 FAPQ12884 760 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 ARHGEF7Q14155 803 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 GALEQ14376 348 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 PRSS36Q5K4E3 855 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 SPANXN4Q5MJ08 99 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 HECTD3Q5T447 861 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 ARMC12Q5T9G4 340 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 KIAA1841Q6NSI8 718 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 B3GNT8Q7Z7M8 397 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 ADAMTSL2Q86TH1 951 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 SERPINA9Q86WD7 417 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 SAMD14Q8IZD0 417 aaPredicted RBP9.07□□□□□ -0.96
SMG6-202ENST00000354901 LSM14AQ8ND56 463 aaKnown RBP9.07□□□□□ -0.96
SMG6-202ENST00000354901 FBXO22Q8NEZ5 403 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 OR4M1Q8NGD0 313 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 OR6C4Q8NGE1 309 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 TRMT61AQ96FX7 289 aaKnown RBP9.07□□□□□ -0.96
SMG6-202ENST00000354901 TRAF4Q9BUZ4 470 aaPredicted RBP9.07□□□□□ -0.96
SMG6-202ENST00000354901 IKZF5Q9H5V7 419 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 CDCP1Q9H5V8 836 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 ASB8Q9H765 288 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 CARS2Q9HA77 564 aaKnown RBP9.07□□□□□ -0.96
SMG6-202ENST00000354901 NUP50Q9UKX7 468 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 SCML1Q9UN30 329 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 RNF6Q9Y252 685 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 GMPPBQ9Y5P6 360 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 A0A096LPI6 279 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 PITPNM1O00562 1244 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 OR7A17O14581 309 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 SGTAO43765 313 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 TBL1XO60907 577 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 SLC25A14O95258 325 aaPredicted RBP9.07□□□□□ -0.96
SMG6-202ENST00000354901 POU1F1P28069 291 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 C21orf33P30042 268 aaPredicted RBP9.07□□□□□ -0.96
SMG6-202ENST00000354901 TGM4P49221 684 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 AP2S1P53680 142 aaPredicted RBP9.07□□□□□ -0.96
SMG6-202ENST00000354901 EMX2Q04743 252 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 CPSF6Q16630 551 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMG6-202ENST00000354901 LAIR2Q6ISS4 152 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 DLEU7Q6UYE1 221 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 BCL7CQ8WUZ0 217 aaPredicted RBP9.07□□□□□ -0.96
SMG6-202ENST00000354901 ULK4Q96C45 1275 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 ZNF382Q96SR6 550 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 BRINP2Q9C0B6 783 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 IL1RAPQ9NPH3 570 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 FANCFQ9NPI8 374 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 ADGRE2Q9UHX3 823 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 PRSS21Q9Y6M0 314 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 A0A1W2PQ09 198 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 PABPN1LA6NDY0 278 aaKnown RBP9.07□□□□□ -0.96
SMG6-202ENST00000354901 FADS2P1A8MWK0 482 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 TRIM77I1YAP6 450 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 ARVCFO00192 962 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 ERN1O75460 977 aaKnown RBP9.07□□□□□ -0.96
SMG6-202ENST00000354901 LRATO95237 230 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 PROS1P07225 676 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 ANXA6P08133 673 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 FOXM1Q08050 763 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 LRRC73Q5JTD7 316 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 COMMD7Q86VX2 200 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 CACTIN-AS1Q8N1I8 211 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 OR2T12Q8NG77 320 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 POF1BQ8WVV4 589 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 KCNJ9Q92806 393 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 COQ8BQ96D53 544 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 MTERF3Q96E29 417 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 TTPALQ9BTX7 342 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.07□□□□□ -0.96
SMG6-202ENST00000354901 RSPH9Q9H1X1 276 aaPredicted RBP9.07□□□□□ -0.96
SMG6-202ENST00000354901 SAGE1Q9NXZ1 904 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 ZIM2Q9NZV7 527 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 CCDC59Q9P031 241 aaKnown RBP9.07□□□□□ -0.96
SMG6-202ENST00000354901 C3orf18Q9UK00 162 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 TMCC3Q9ULS5 477 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 KCNE2Q9Y6J6 123 aa9.07□□□□□ -0.96
SMG6-202ENST00000354901 A0A1B0GVM2 712 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 UPK3BL1B0FP48 263 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 UPK3BL2E5RIL1 263 aa9.06□□□□□ -0.96
SMG6-202ENST00000354901 H3BQ06 376 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms