RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 ING5Q8WYH8 240 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 CHST8Q9H2A9 424 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 TRIM39Q9HCM9 518 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 ADPRHL2Q9NX46 363 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 SH3BP4Q9P0V3 963 aa21.44■■□□□ 1.02
NKX2-1-201ENST00000354822 A0A1W2PPW3 197 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 SOD1P00441 154 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 POU2F2P09086 479 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 GPR1P46091 355 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 STT3AP46977 705 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 CXCR4P61073 352 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 LAIR2Q6ISS4 152 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 CEP68Q76N32 757 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 TRAPPC5Q8IUR0 188 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 OR8D1Q8WZ84 308 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 LZICQ8WZA0 190 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 NUS1Q96E22 293 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 NAA50Q9GZZ1 169 aaKnown RBP21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 REEP4Q9H6H4 257 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 REEP1Q9H902 201 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 PCDHGB1Q9Y5G3 927 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 C1QCP02747 245 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 ITIH1P19827 911 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 PCGF2P35227 344 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 ITGA1P56199 1179 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 VLDLRP98155 873 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 IL5RAQ01344 420 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 DPTQ07507 201 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 ZNF763Q0D2J5 394 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 FGD3Q5JSP0 725 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 VTCN1Q7Z7D3 282 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 GPR156Q8NFN8 814 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 GOT1L1Q8NHS2 421 aaPredicted RBP21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 APOL4Q9BPW4 351 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 DPH2Q9BQC3 489 aaPredicted RBP21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 OR2AG1Q9H205 316 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 DPEP2Q9H4A9 486 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 PSME2Q9UL46 239 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 GPR34Q9UPC5 381 aa21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 SAMHD1Q9Y3Z3 626 aaKnown RBP21.43■■□□□ 1.02
NKX2-1-201ENST00000354822 EDDM13A0A1B0GTR0 161 aa21.42■■□□□ 1.02
NKX2-1-201ENST00000354822 hCG_2039718K7EN88 272 aa21.42■■□□□ 1.02
NKX2-1-201ENST00000354822 SUV39H1O43463 412 aa21.42■■□□□ 1.02
NKX2-1-201ENST00000354822 AGXTP21549 392 aa21.42■■□□□ 1.02
NKX2-1-201ENST00000354822 NFATC3Q12968 1075 aa21.42■■□□□ 1.02
NKX2-1-201ENST00000354822 RAPSNQ13702 412 aa21.42■■□□□ 1.02
NKX2-1-201ENST00000354822 ADNP2Q6IQ32 1131 aa21.42■■□□□ 1.02
NKX2-1-201ENST00000354822 C11orf65Q8NCR3 313 aa21.42■■□□□ 1.02
NKX2-1-201ENST00000354822 OR4A15Q8NGL6 344 aa21.42■■□□□ 1.02
NKX2-1-201ENST00000354822 SETD7Q8WTS6 366 aaKnown RBP21.42■■□□□ 1.02
NKX2-1-201ENST00000354822 UBE2E3Q969T4 207 aa21.42■■□□□ 1.02
NKX2-1-201ENST00000354822 LRRC3BQ96PB8 259 aa21.42■■□□□ 1.02
NKX2-1-201ENST00000354822 PDP1Q9P0J1 537 aaPredicted RBP21.42■■□□□ 1.02
NKX2-1-201ENST00000354822 TPRKBQ9Y3C4 175 aa21.42■■□□□ 1.02
NKX2-1-201ENST00000354822 ALPK3Q96L96 1907 aa21.42■■□□□ 1.02
NKX2-1-201ENST00000354822 C5orf67F2Z3F1 127 aa21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 SPINT1O43278 529 aa21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 MITFO75030 526 aaPredicted RBP21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 HTR1AP08908 422 aa21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 PLA2G16P53816 162 aa21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 CAMK1Q14012 370 aa21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 SLBPQ14493 270 aaKnown RBP eCLIP21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 HNRNPA1L2Q32P51 320 aaKnown RBP21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 RAET1GQ6H3X3 334 aa21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 C12orf40Q86WS4 652 aa21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 BPIFB6Q8NFQ5 453 aa21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 MUL1Q969V5 352 aa21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 PPP1R16AQ96I34 528 aa21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 RIBC2Q9H4K1 309 aa21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 COQ6Q9Y2Z9 468 aa21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 LZTS3O60299 673 aaPredicted RBP21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 SH3BGRLO75368 114 aa21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 ANGPTL1O95841 491 aa21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 CATSPEREQ5SY80 951 aa21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 TRMT11Q7Z4G4 463 aaKnown RBP21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 UBE2Q1Q7Z7E8 422 aa21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 GALNT5Q7Z7M9 940 aa21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 SLC5A11Q8WWX8 675 aa21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 EZH1Q92800 747 aaPredicted RBP21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 NUP214P35658 2090 aaPredicted RBP21.41■■□□□ 1.02
NKX2-1-201ENST00000354822 PTGES3LE9PB15 166 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 VEGFDO43915 354 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 C9P02748 559 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 JUNDP17535 347 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 PHEXP78562 749 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 TAP2Q03519 686 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 STARD3Q14849 445 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 C16orf72Q14CZ0 275 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 FNDC3BQ53EP0 1204 aaKnown RBP21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 C9orf64Q5T6V5 341 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 ZNF697Q5TEC3 545 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 PDE12Q6L8Q7 609 aaKnown RBP21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 NXPE4Q6UWF7 544 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 TSPYL5Q86VY4 417 aaPredicted RBP21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 ETFBKMTQ8IXQ9 262 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 B4GALNT2Q8NHY0 566 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 ARRDC3Q96B67 414 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 TPD52L3Q96J77 140 aa21.4■■□□□ 1.02
NKX2-1-201ENST00000354822 EPYCQ99645 322 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms