RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 A8MU76 341 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 TMEM229AB2RXF0 380 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 H7C4K7 107 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 CCRL2O00421 344 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 KIAA0513O60268 411 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 SOCS5O75159 536 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 LRATO95237 230 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 PARNO95453 639 aaKnown RBP11.02□□□□□ -0.65
CAPN9-202ENST00000354537 VNN2O95498 520 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 LATS1O95835 1130 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 PTHP01270 115 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 COL6A1P12109 1028 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 CHMP24386 653 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 AOAHP28039 575 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 HMGA2P52926 109 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 AP1S2P56377 157 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 RBBP4Q09028 425 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 KCNC3Q14003 757 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 CLLU1OSQ5K130 101 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 ATAD3CQ5T2N8 411 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 HECTD3Q5T447 861 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.02□□□□□ -0.65
CAPN9-202ENST00000354537 UBE2R2Q712K3 238 aaPredicted RBP11.02□□□□□ -0.65
CAPN9-202ENST00000354537 TSEN54Q7Z6J9 526 aaKnown RBP11.02□□□□□ -0.65
CAPN9-202ENST00000354537 ATCAYQ86WG3 371 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 CYP4Z2PQ8N1L4 340 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 SLC5A8Q8N695 610 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 C1orf52Q8N6N3 182 aaKnown RBP11.02□□□□□ -0.65
CAPN9-202ENST00000354537 SOCS4Q8WXH5 440 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 CCDC97Q96F63 343 aaPredicted RBP11.02□□□□□ -0.65
CAPN9-202ENST00000354537 TPD52L3Q96J77 140 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 FAM193BQ96PV7 902 aaPredicted RBP11.02□□□□□ -0.65
CAPN9-202ENST00000354537 CHCHD6Q9BRQ6 235 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 NDUFAF4Q9P032 175 aa11.02□□□□□ -0.65
CAPN9-202ENST00000354537 HMX3A6NHT5 357 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 B3GALT4O96024 378 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 BPIP17213 487 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 ENDOUP21128 410 aaKnown RBP11.01□□□□□ -0.65
CAPN9-202ENST00000354537 CA5AP35218 305 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 HNF4AP41235 474 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 CRYBA2P53672 197 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 RHAGQ02094 409 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 RGNQ15493 299 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 CHRNA6Q15825 494 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 CARTPTQ16568 116 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 IFI44LQ53G44 452 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 C6orf183Q5T699 404 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 ERAP2Q6P179 960 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 VN1R5Q7Z5H4 357 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 TRIM69Q86WT6 500 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 CELF2-AS1Q8N7Q2 184 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 ASCC1Q8N9N2 400 aaKnown RBP11.01□□□□□ -0.65
CAPN9-202ENST00000354537 ASB11Q8WXH4 323 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 CXorf40BQ96DE9 158 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 OR2A14Q96R47 310 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 MGLLQ99685 303 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 DUSP26Q9BV47 211 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 TAPBPLQ9BX59 468 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 CRISPLD1Q9H336 500 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 ZNF556Q9HAH1 456 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 SPATA6Q9NWH7 488 aaPredicted RBP11.01□□□□□ -0.65
CAPN9-202ENST00000354537 GPR83Q9NYM4 423 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 VPS29Q9UBQ0 182 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 ZNF282Q9UDV7 671 aaPredicted RBP11.01□□□□□ -0.65
CAPN9-202ENST00000354537 PLXNA4Q9HCM2 1894 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 CENPXA8MT69 81 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 H3BQ06 376 aaPredicted RBP11.01□□□□□ -0.65
CAPN9-202ENST00000354537 GFRA2O00451 464 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 HOXC11O43248 304 aaPredicted RBP11.01□□□□□ -0.65
CAPN9-202ENST00000354537 STC2O76061 302 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 CPSF4O95639 269 aaKnown RBP11.01□□□□□ -0.65
CAPN9-202ENST00000354537 KLKB1P03952 638 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 ALPIP09923 528 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 CORO1AP31146 461 aaKnown RBP11.01□□□□□ -0.65
CAPN9-202ENST00000354537 SGSHP51688 502 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 NKX2-5P52952 324 aaPredicted RBP11.01□□□□□ -0.65
CAPN9-202ENST00000354537 CDC42P60953 191 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 MBTPS1Q14703 1052 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 CDK10Q15131 360 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 LRRC26Q2I0M4 334 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 RNLSQ5VYX0 342 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 LRRC66Q68CR7 880 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 MBOAT1Q6ZNC8 495 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 RAB43Q86YS6 212 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 SLC44A2Q8IWA5 706 aaPredicted RBP11.01□□□□□ -0.65
CAPN9-202ENST00000354537 NLGN4XQ8N0W4 816 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 GOT1L1Q8NHS2 421 aaPredicted RBP11.01□□□□□ -0.65
CAPN9-202ENST00000354537 COQ8BQ96D53 544 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 C11orf24Q96F05 449 aaPredicted RBP11.01□□□□□ -0.65
CAPN9-202ENST00000354537 Q96MT0 163 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 LYSMD1Q96S90 227 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 NDEL1Q9GZM8 345 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 SLA2Q9H6Q3 261 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 TRMT13Q9NUP7 481 aaKnown RBP11.01□□□□□ -0.65
CAPN9-202ENST00000354537 IMPAD1Q9NX62 359 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 TBC1D24Q9ULP9 559 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 VPS4AQ9UN37 437 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 DUSP12Q9UNI6 340 aa11.01□□□□□ -0.65
CAPN9-202ENST00000354537 PRG3Q9Y2Y8 225 aaPredicted RBP11.01□□□□□ -0.65
CAPN9-202ENST00000354537 OR51B4Q9Y5P0 310 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms