RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 NAV1Q8NEY1 1877 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 CPNE3O75131 537 aaKnown RBP15.51■□□□□ 0.07
PTPN11-201ENST00000351677 BLKP51451 505 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 ARSFP54793 590 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 TLR1Q15399 786 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 OVCA2Q8WZ82 227 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 RAB8BQ92930 207 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 SLC7A6OSQ96CW6 309 aaPredicted RBP15.51■□□□□ 0.07
PTPN11-201ENST00000351677 TMED9Q9BVK6 235 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 BHLHE41Q9C0J9 482 aaPredicted RBP15.51■□□□□ 0.07
PTPN11-201ENST00000351677 TM9SF3Q9HD45 589 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 PHF24Q9UPV7 400 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 RGPD1P0DJD0 1748 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 PRODHO43272 600 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 CLPXO76031 633 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 SNAP29O95721 258 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 TMEM44Q2T9K0 475 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 XKR4Q5GH76 650 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 NATD1Q8N6N6 113 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 PLEKHA1Q9HB21 404 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 PTGESO14684 152 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 TLX2O43763 284 aaPredicted RBP15.51■□□□□ 0.07
PTPN11-201ENST00000351677 ZNF823P16415 610 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 AP3S2P59780 193 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 PPP3R1P63098 170 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 NOXRED1Q6NXP6 359 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 MARCH9Q86YJ5 346 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 CFL2Q9Y281 166 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 MYH15Q9Y2K3 1946 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 RING1Q06587 406 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 SCAPQ12770 1279 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 GRM2Q14416 872 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 OR4D1Q15615 310 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 XKR5Q6UX68 686 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 OR8H1Q8NGG4 311 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 RHEBL1Q8TAI7 183 aa15.51■□□□□ 0.07
PTPN11-201ENST00000351677 DOT1LQ8TEK3 1739 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 TMEM150CB9EJG8 249 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 SOCS5O75159 536 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 HMGN1P05114 100 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 ACRV1P26436 265 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 SMSP52788 366 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 BARD1Q99728 777 aaKnown RBP15.5■□□□□ 0.07
PTPN11-201ENST00000351677 FKBP7Q9Y680 259 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 TSPAN6O43657 245 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 ORC5O43913 435 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 INMTO95050 263 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 MATN1P21941 496 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 CEACAM7Q14002 265 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 LASP1Q14847 261 aaKnown RBP15.5■□□□□ 0.07
PTPN11-201ENST00000351677 PLEKHS1Q5SXH7 462 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 MAMDC4Q6UXC1 1216 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 DPY19L3Q6ZPD9 716 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 FAM46DQ8NEK8 389 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 MUS81Q96NY9 551 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 OARD1Q9Y530 152 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 MYH1P12882 1939 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 PRSS56P0CW18 603 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 OR2B6P58173 313 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 ZNF763Q0D2J5 394 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 SMCO1Q147U7 214 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 KIAA1614Q5VZ46 1190 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 IRF7Q92985 503 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 HSPBAP1Q96EW2 488 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 PIGUQ9H490 435 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 TNFRSF10DQ9UBN6 386 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 ITGB1P05556 798 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 ZNF3P17036 446 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 NDUFS1P28331 727 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 RPS3AP61247 264 aaKnown RBP15.5■□□□□ 0.07
PTPN11-201ENST00000351677 SCRN3Q0VDG4 424 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 PUM1Q14671 1186 aaKnown RBP eCLIP15.5■□□□□ 0.071e-6■■■■■ 34.5
PTPN11-201ENST00000351677 ABRAXAS2Q15018 415 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 ZNF773Q6PK81 442 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 DPYSL5Q9BPU6 564 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 A0A1W2PPW3 197 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 K7ERQ8 282 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 KMOO15229 486 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 REM1O75628 298 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 GHRHRQ02643 423 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 ZNF630Q2M218 657 aaPredicted RBP15.5■□□□□ 0.07
PTPN11-201ENST00000351677 ARL9Q6T311 187 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 ASB18Q6ZVZ8 466 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 CAMKVQ8NCB2 501 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 DGAT2Q96PD7 388 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 RANBP9Q96S59 729 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 NEUROD4Q9HD90 331 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 DNAJC27Q9NZQ0 273 aa15.5■□□□□ 0.07
PTPN11-201ENST00000351677 ONECUT3O60422 494 aaPredicted RBP15.49■□□□□ 0.07
PTPN11-201ENST00000351677 GSTM3P21266 225 aa15.49■□□□□ 0.07
PTPN11-201ENST00000351677 TPRG1LQ5T0D9 272 aa15.49■□□□□ 0.07
PTPN11-201ENST00000351677 EMC10Q5UCC4 262 aa15.49■□□□□ 0.07
PTPN11-201ENST00000351677 PGBD2Q6P3X8 592 aa15.49■□□□□ 0.07
PTPN11-201ENST00000351677 HSDL2Q6YN16 418 aa15.49■□□□□ 0.07
PTPN11-201ENST00000351677 DCUN1D3Q8IWE4 304 aa15.49■□□□□ 0.07
PTPN11-201ENST00000351677 SMPDL3BQ92485 455 aa15.49■□□□□ 0.07
PTPN11-201ENST00000351677 ZSWIM3Q96MP5 696 aa15.49■□□□□ 0.07
PTPN11-201ENST00000351677 MAPKAP1Q9BPZ7 522 aa15.49■□□□□ 0.07
PTPN11-201ENST00000351677 C17orf62Q9BQA9 187 aa15.49■□□□□ 0.07
PTPN11-201ENST00000351677 CLCA3PQ9Y6N3 262 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms