RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 ZNF483Q8TF39 744 aaPredicted RBP13.3□□□□□ -0.28
SEC13-202ENST00000350697 ZBTB9Q96C00 473 aa13.3□□□□□ -0.28
SEC13-202ENST00000350697 FAM111AQ96PZ2 611 aa13.3□□□□□ -0.28
SEC13-202ENST00000350697 DPH2Q9BQC3 489 aaPredicted RBP13.3□□□□□ -0.28
SEC13-202ENST00000350697 ACTR8Q9H981 624 aa13.3□□□□□ -0.28
SEC13-202ENST00000350697 SSU72Q9NP77 194 aaKnown RBP13.3□□□□□ -0.28
SEC13-202ENST00000350697 LHX9Q9NQ69 397 aa13.3□□□□□ -0.28
SEC13-202ENST00000350697 DHCR7Q9UBM7 475 aaKnown RBP13.3□□□□□ -0.28
SEC13-202ENST00000350697 A0A1B0GX78 115 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 DSCR3O14972 297 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 NDUFS4O43181 175 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 KLK10O43240 276 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 TYROBPO43914 113 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 ALAS2P22557 587 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 HNF4AP41235 474 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 STAT5AP42229 794 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 RGS1Q08116 209 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 NDUFA9Q16795 377 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 ZNF678Q5SXM1 525 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 LIPJQ5W064 366 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 ZNF385CQ66K41 422 aaPredicted RBP13.29□□□□□ -0.28
SEC13-202ENST00000350697 ZNF517Q6ZMY9 492 aaPredicted RBP13.29□□□□□ -0.28
SEC13-202ENST00000350697 LRRC69Q6ZNQ3 347 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 SPACA3Q8IXA5 215 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 ANKRD53Q8N9V6 530 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 ARMC2Q8NEN0 867 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 TRPV3Q8NET8 790 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 TCP10LQ8TDR4 215 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 PPP4R1Q8TF05 950 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 MR1Q95460 341 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 UBE2E3Q969T4 207 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 ATP6V1E2Q96A05 226 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 L3HYPDHQ96EM0 354 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 SEC16BQ96JE7 1060 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 C10orf90Q96M02 699 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 NSUN5Q96P11 429 aaKnown RBP13.29□□□□□ -0.28
SEC13-202ENST00000350697 DCBLD2Q96PD2 775 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 GBP5Q96PP8 586 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 TMEM237Q96Q45 408 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 SH3GL2Q99962 352 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 NTMT1Q9BV86 223 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 NOL11Q9H8H0 719 aaKnown RBP13.29□□□□□ -0.28
SEC13-202ENST00000350697 TMBIM4Q9HC24 238 aa13.29□□□□□ -0.28
SEC13-202ENST00000350697 SEMA4BQ9NPR2 832 aaPredicted RBP13.29□□□□□ -0.28
SEC13-202ENST00000350697 FER1L5A0AVI2 2057 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 A0A087WV48 116 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 ANKDD1BA6NHY2 528 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 OR7A17O14581 309 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 SUPT7LO94864 414 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 STATHP02808 62 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 SERPIND1P05546 499 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 AGXTP21549 392 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 ARL1P40616 181 aaPredicted RBP13.28□□□□□ -0.28
SEC13-202ENST00000350697 CCNG1P51959 295 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 DNAJB13P59910 316 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 NAA20P61599 178 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 DCDP81605 110 aaKnown RBP13.28□□□□□ -0.28
SEC13-202ENST00000350697 CLCQ05315 142 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 FAM53BQ14153 422 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 UNC50Q53HI1 259 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 C1orf189Q5VU69 101 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 GRHL2Q6ISB3 625 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 RPS27LQ71UM5 84 aaKnown RBP13.28□□□□□ -0.28
SEC13-202ENST00000350697 MYLK4Q86YV6 388 aaPredicted RBP13.28□□□□□ -0.28
SEC13-202ENST00000350697 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.28□□□□□ -0.285e-6■■■■■ 55.7
SEC13-202ENST00000350697 ARHGEF39Q8N4T4 335 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 L3MBTL4Q8NA19 623 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 NT5CQ8TCD5 201 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 KIAA1143Q96AT1 154 aaPredicted RBP13.28□□□□□ -0.28
SEC13-202ENST00000350697 MVB12AQ96EY5 273 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 MACROD1Q9BQ69 325 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 CHST8Q9H2A9 424 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 AKIRIN1Q9H9L7 192 aaPredicted RBP13.28□□□□□ -0.28
SEC13-202ENST00000350697 ZBTB26Q9HCK0 441 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 WDR70Q9NW82 654 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 OXSMQ9NWU1 459 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 SLC17A7Q9P2U7 560 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 NDOR1Q9UHB4 597 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 ZMIZ1Q9ULJ6 1067 aa13.28□□□□□ -0.28
SEC13-202ENST00000350697 ZNF490Q9ULM2 529 aaPredicted RBP13.28□□□□□ -0.28
SEC13-202ENST00000350697 LOC101059948A0A1B0GTJ6 334 aa13.27□□□□□ -0.29
SEC13-202ENST00000350697 HMGB1P1B2RPK0 211 aaPredicted RBP13.27□□□□□ -0.29
SEC13-202ENST00000350697 AGPSO00116 658 aa13.27□□□□□ -0.29
SEC13-202ENST00000350697 MED26O95402 600 aa13.27□□□□□ -0.29
SEC13-202ENST00000350697 CLDN9O95484 217 aa13.27□□□□□ -0.29
SEC13-202ENST00000350697 OTCP00480 354 aa13.27□□□□□ -0.29
SEC13-202ENST00000350697 SERPINA6P08185 405 aa13.27□□□□□ -0.29
SEC13-202ENST00000350697 CDH13P55290 713 aa13.27□□□□□ -0.29
SEC13-202ENST00000350697 CYP4F2P78329 520 aa13.27□□□□□ -0.29
SEC13-202ENST00000350697 TRAF3Q13114 568 aa13.27□□□□□ -0.29
SEC13-202ENST00000350697 RBBP7Q16576 425 aa13.27□□□□□ -0.29
SEC13-202ENST00000350697 ST3GAL2Q16842 350 aa13.27□□□□□ -0.29
SEC13-202ENST00000350697 TMEM214Q6NUQ4 689 aaKnown RBP13.27□□□□□ -0.29
SEC13-202ENST00000350697 MED27Q6P2C8 311 aa13.27□□□□□ -0.29
SEC13-202ENST00000350697 PRMT9Q6P2P2 845 aa13.27□□□□□ -0.29
SEC13-202ENST00000350697 FAM199XQ6PEV8 388 aaPredicted RBP13.27□□□□□ -0.29
SEC13-202ENST00000350697 LAS2Q8IYD9 372 aa13.27□□□□□ -0.29
SEC13-202ENST00000350697 CCNYL1Q8N7R7 359 aa13.27□□□□□ -0.29
SEC13-202ENST00000350697 KCT2Q8NC54 265 aa13.27□□□□□ -0.29
SEC13-202ENST00000350697 OR52B6Q8NGF0 335 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 91.8 ms