RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 ZNF517Q6ZMY9 492 aaPredicted RBP14.28□□□□□ -0.12
NUP50-201ENST00000347635 GRASPQ7Z6J2 395 aaPredicted RBP14.28□□□□□ -0.12
NUP50-201ENST00000347635 CFAP206Q8IYR0 622 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 IL4I1Q96RQ9 567 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 POLR2J3Q9H1A7 115 aaKnown RBP14.28□□□□□ -0.12
NUP50-201ENST00000347635 DKK3Q9UBP4 350 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 OAS3Q9Y6K5 1087 aaKnown RBP14.28□□□□□ -0.12
NUP50-201ENST00000347635 WASH4PA8MWX3 477 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 ATP1B2P14415 290 aaPredicted RBP14.28□□□□□ -0.12
NUP50-201ENST00000347635 PCSK6P29122 969 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 SSR2P43308 183 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 SP140Q13342 867 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 UBE2J2Q8N2K1 259 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 COL26A1Q96A83 441 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 ANKRA2Q9H9E1 313 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 CD300AQ9UGN4 299 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 IL36AQ9UHA7 158 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 SAP18O00422 153 aaKnown RBP14.28□□□□□ -0.12
NUP50-201ENST00000347635 BMP7P18075 431 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 PRDX3P30048 256 aaKnown RBP14.28□□□□□ -0.12
NUP50-201ENST00000347635 CCT3P49368 545 aaKnown RBP14.28□□□□□ -0.12
NUP50-201ENST00000347635 XKP51811 444 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 RGS1Q08116 209 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 CRTC2Q53ET0 693 aaPredicted RBP14.28□□□□□ -0.12
NUP50-201ENST00000347635 SCD5Q86SK9 330 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 GALNT13Q8IUC8 556 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 UFD1Q92890 307 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 NECTIN4Q96NY8 510 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 MND1Q9BWT6 205 aa14.28□□□□□ -0.12
NUP50-201ENST00000347635 KLHL22Q53GT1 634 aa14.27□□□□□ -0.12
NUP50-201ENST00000347635 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.27□□□□□ -0.12
NUP50-201ENST00000347635 C6orf183Q5T699 404 aa14.27□□□□□ -0.12
NUP50-201ENST00000347635 TMEM53Q6P2H8 277 aa14.27□□□□□ -0.12
NUP50-201ENST00000347635 KRT74Q7RTS7 529 aa14.27□□□□□ -0.12
NUP50-201ENST00000347635 LRRTM3Q86VH5 581 aa14.27□□□□□ -0.12
NUP50-201ENST00000347635 FLCNQ8NFG4 579 aa14.27□□□□□ -0.12
NUP50-201ENST00000347635 OR5AK3PQ8NH89 298 aa14.27□□□□□ -0.12
NUP50-201ENST00000347635 GMPR2Q9P2T1 348 aaKnown RBP14.27□□□□□ -0.12
NUP50-201ENST00000347635 TRBC2A0A5B9 178 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 MITFO75030 526 aaPredicted RBP14.27□□□□□ -0.13
NUP50-201ENST00000347635 DHFRP00374 187 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 ZNF30P17039 623 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 AKT2P31751 481 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 DSTNP60981 165 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 PCBP2Q15366 365 aaKnown RBP eCLIP14.27□□□□□ -0.136e-7■■■■■ 32.5
NUP50-201ENST00000347635 HSF5Q4G112 596 aaPredicted RBP14.27□□□□□ -0.13
NUP50-201ENST00000347635 CES4AQ5XG92 561 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 THOC7Q6I9Y2 204 aaKnown RBP14.27□□□□□ -0.13
NUP50-201ENST00000347635 NOXRED1Q6NXP6 359 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 NXPE1Q8N323 547 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 AQP11Q8NBQ7 271 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 SLITRK2Q9H156 845 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 MARCH7Q9H992 704 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 PCDHA9Q9Y5H5 950 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 RETP07949 1114 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 BLVRAP53004 296 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 EOGTQ5NDL2 527 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 TMEM220Q6QAJ8 160 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 NDNFQ8TB73 568 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 KLHL6Q8WZ60 621 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 ATOH8Q96SQ7 321 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 CSNK1G1Q9HCP0 422 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 AGXTP21549 392 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 MATN1P21941 496 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 ACRV1P26436 265 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 NCS1P62166 190 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 ANGPT1Q15389 498 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 TNFAIP8L2Q6P589 184 aaPredicted RBP14.27□□□□□ -0.13
NUP50-201ENST00000347635 C11orf88Q6PI97 169 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 VITQ6UXI7 678 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 FAM124AQ86V42 546 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 SLC43A3Q8NBI5 491 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 NETO1Q8TDF5 533 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 FCRL4Q96PJ5 515 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 MYOCQ99972 504 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 SLC2A11Q9BYW1 496 aa14.27□□□□□ -0.13
NUP50-201ENST00000347635 NAA50Q9GZZ1 169 aaKnown RBP14.27□□□□□ -0.13
NUP50-201ENST00000347635 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.26□□□□□ -0.13
NUP50-201ENST00000347635 PDPK1O15530 556 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 ARRB2P32121 409 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 DCTP40126 519 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 RPS3AP61247 264 aaKnown RBP14.26□□□□□ -0.13
NUP50-201ENST00000347635 CDK6Q00534 326 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 NPRL3Q12980 569 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 RAPSNQ13702 412 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 SMU1Q2TAY7 513 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 CLLU1OSQ5K130 101 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 ZNF598Q86UK7 904 aaKnown RBP14.26□□□□□ -0.13
NUP50-201ENST00000347635 CD200R1Q8TD46 325 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 RERGQ96A58 199 aaPredicted RBP14.26□□□□□ -0.13
NUP50-201ENST00000347635 MS4A12Q9NXJ0 267 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 SPO11Q9Y5K1 396 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 LY75O60449 1722 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 TPST2O60704 377 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 MTX2O75431 263 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 CHRM5P08912 532 aaPredicted RBP14.26□□□□□ -0.13
NUP50-201ENST00000347635 HPGDP15428 266 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 ITIH1P19827 911 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 KDELR2P33947 212 aa14.26□□□□□ -0.13
NUP50-201ENST00000347635 SEMA3BQ13214 749 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms