RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 ZNF806P0C7X5 589 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 CD36P16671 472 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 SHMT2P34897 504 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 GRM2Q14416 872 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 ZNF630Q2M218 657 aaPredicted RBP22.42■■□□□ 1.18
NPAS3-201ENST00000346562 PAQR7Q86WK9 346 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 AKAP1Q92667 903 aaKnown RBP eCLIP22.42■■□□□ 1.18
NPAS3-201ENST00000346562 ZDHHC12Q96GR4 267 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 DERL2Q9GZP9 239 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 ASB6Q9NWX5 421 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 GNG8Q9UK08 70 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 ANKRD66B4E2M5 251 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 ARL3P36405 182 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 DEFB119Q8N690 84 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 DCAF4L2Q8NA75 395 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 PKP4Q99569 1192 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 ZNF471Q9BX82 626 aaPredicted RBP22.42■■□□□ 1.18
NPAS3-201ENST00000346562 PCDHGA2Q9Y5H1 932 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 SLIT2O94813 1529 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 SRCP12931 536 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 MERTKQ12866 999 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 MR1Q95460 341 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 MOV10Q9HCE1 1003 aaKnown RBP22.42■■□□□ 1.18
NPAS3-201ENST00000346562 MAGEE1Q9HCI5 957 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 STATHP02808 62 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 CCNOP22674 350 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 AAK1Q2M2I8 961 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 TMEM110Q86TL2 294 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 ASB9Q96DX5 294 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 COQ4Q9Y3A0 265 aa22.42■■□□□ 1.18
NPAS3-201ENST00000346562 C2orf74A8MZ97 194 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 FBXO43Q4G163 708 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 MS4A13Q5J8X5 152 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 ZNF366Q8N895 744 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 RBP7Q96R05 134 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 ZSCAN5BA6NJL1 495 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 KCNQ1P51787 676 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 TAS2R43P59537 309 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 PLP2Q04941 152 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 TMIGD1Q6UXZ0 262 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 NAT8LQ8N9F0 302 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 MFSD2AQ8NA29 543 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 MRM3Q9HC36 420 aaKnown RBP22.41■■□□□ 1.18
NPAS3-201ENST00000346562 EBLN1P0CF75 366 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 OR2T5Q6IEZ7 315 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 ARL9Q6T311 187 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 MINDY2Q8NBR6 621 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 OR2T29Q8NH02 315 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 TMEM248Q9NWD8 314 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 ABCD2Q9UBJ2 740 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 TP53I11O14683 189 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 OPN1SWP03999 348 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 SOD2P04179 222 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 SLC11A1P49279 550 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 GRPEL2Q8TAA5 225 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 EHD1Q9H4M9 534 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 GRXCR1A8MXD5 290 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 J3QLW9 94 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 GRID2O43424 1007 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 KDM4BO94953 1096 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 FHP07954 510 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 ZNF19P17023 458 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 TPRG1LQ5T0D9 272 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 CMTM8Q8IZV2 173 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 PACRGLQ8N7B6 248 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 OR4F6Q8NGB9 312 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 TTYH3Q9C0H2 523 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 NLGN3Q9NZ94 848 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 PLAGL1Q9UM63 463 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 IFT52Q9Y366 437 aa22.41■■□□□ 1.18
NPAS3-201ENST00000346562 FARS2O95363 451 aaKnown RBP22.4■■□□□ 1.18
NPAS3-201ENST00000346562 S100A10P60903 97 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 RNF220Q5VTB9 566 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 DISC1C4P0D8 188 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 EI24O14681 340 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 NPTX1Q15818 432 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 ITPAQ9BY32 194 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 MAFFQ9ULX9 164 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 GIMAP1-GIMAP5A0A087WTJ2 511 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 A0A1W2PPL8 197 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 KCNE1P15382 129 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 RPS13P62277 151 aaKnown RBP22.4■■□□□ 1.18
NPAS3-201ENST00000346562 POF1BQ8WVV4 589 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 ZNF641Q96N77 438 aaPredicted RBP22.4■■□□□ 1.18
NPAS3-201ENST00000346562 HHATLQ9HCP6 504 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 A0A1B0GVC2 190 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 RNF13O43567 381 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 ZNF12P17014 697 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 HERV-K104P61576 105 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 GPR17Q13304 367 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 EIF2S3LQ2VIR3 472 aaKnown RBP22.4■■□□□ 1.18
NPAS3-201ENST00000346562 SH3D19Q5HYK7 790 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 SSX6Q7RTT6 188 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 TMED9Q9BVK6 235 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 TUBA8Q9NY65 449 aaPredicted RBP22.4■■□□□ 1.18
NPAS3-201ENST00000346562 PRODH2Q9UF12 536 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 ALG5Q9Y673 324 aa22.4■■□□□ 1.18
NPAS3-201ENST00000346562 BLOC1S5-TXNDC5H3BN57 136 aa22.39■■□□□ 1.18
NPAS3-201ENST00000346562 MATN2O00339 956 aa22.39■■□□□ 1.18
NPAS3-201ENST00000346562 HSPA12AO43301 675 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms