RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ZNF730Q6ZMV8 503 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 SLC39A11Q8N1S5 342 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 SMG8Q8ND04 991 aaKnown RBP10.55□□□□□ -0.72
CLCN6-202ENST00000346436 HTRA1Q92743 480 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 BORCS5Q969J3 196 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 CDKN2AIPNLQ96HQ2 116 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 ADAP2Q9NPF8 381 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 IL1RAPQ9NPH3 570 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 MTMR10Q9NXD2 777 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 MARCH4Q9P2E8 410 aaPredicted RBP10.55□□□□□ -0.72
CLCN6-202ENST00000346436 ADAMTS5Q9UNA0 930 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 SLC22A2O15244 555 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 NDUFS4O43181 175 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 GPIP06744 558 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 TFPTP0C1Z6 253 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 PRPS2P11908 318 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 CD247P20963 164 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 UGT1A4P22310 534 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 CD6P30203 668 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 UGT1A3P35503 534 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 LAPTM4AQ15012 233 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 GCNT6Q5T4J0 391 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 HIPK1Q86Z02 1210 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 POC5Q8NA72 575 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 MYLIPQ8WY64 445 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 LYARQ9NX58 379 aaKnown RBP10.55□□□□□ -0.72
CLCN6-202ENST00000346436 MS4A12Q9NXJ0 267 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 BCKDKO14874 412 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 PAK4O96013 591 aaPredicted RBP10.55□□□□□ -0.72
CLCN6-202ENST00000346436 EPCAMP16422 314 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 GRM7Q14831 915 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 TIMM50Q3ZCQ8 353 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 BICRALQ6AI39 1079 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 SLC45A3Q96JT2 553 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 MRGPRX2Q96LB1 330 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 PCDH10Q9P2E7 1040 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 IKZF2Q9UKS7 526 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 TCRBV5S1A1TA0A578 114 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 RIIAD1A6NNX1 92 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 HTRA2O43464 458 aaPredicted RBP10.55□□□□□ -0.72
CLCN6-202ENST00000346436 GPR32O75388 356 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 RENP00797 406 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 PRKACGP22612 351 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 IGFBP5P24593 272 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 OR4D2P58180 307 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 COX10Q12887 443 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 TRAP1Q12931 704 aaKnown RBP10.55□□□□□ -0.72
CLCN6-202ENST00000346436 ZNF678Q5SXM1 525 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 ZNF280BQ86YH2 543 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 TMEM234Q8WY98 164 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 HPS1Q92902 700 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 PYCR2Q96C36 320 aa10.55□□□□□ -0.72
CLCN6-202ENST00000346436 CPNE2Q96FN4 548 aaPredicted RBP10.55□□□□□ -0.72
CLCN6-202ENST00000346436 COL2A1P02458 1487 aaPredicted RBP10.54□□□□□ -0.72
CLCN6-202ENST00000346436 H3BNX3 289 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 E2F3O00716 465 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 SERPINA1P01009 418 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 VIPR2P41587 438 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 CDKN2DP55273 166 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 BDH1Q02338 343 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 ZNF423Q2M1K9 1284 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 LIX1LQ8IVB5 337 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 SLC30A8Q8IWU4 369 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 SLC22A15Q8IZD6 547 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 MRPL43Q8N983 215 aaKnown RBP10.54□□□□□ -0.72
CLCN6-202ENST00000346436 SLC38A4Q969I6 547 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 TOP1MTQ969P6 601 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 A0A1B0GTW7 788 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 ERI3O43414 337 aaKnown RBP10.54□□□□□ -0.72
CLCN6-202ENST00000346436 PABPC4LP0CB38 370 aaKnown RBP10.54□□□□□ -0.72
CLCN6-202ENST00000346436 ABOP16442 354 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 IL7RP16871 459 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 FMO3P31513 532 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 ATP12AP54707 1039 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 ENPP2Q13822 863 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 ZBTB6Q15916 424 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 UPP1Q16831 310 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 AHSA2Q719I0 299 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 ZNF534Q76KX8 674 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 ANKFN1Q8N957 763 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 ZDHHC1Q8WTX9 485 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 MZB1Q8WU39 189 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 MMABQ96EY8 250 aaPredicted RBP10.54□□□□□ -0.72
CLCN6-202ENST00000346436 SP140LQ9H930 580 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 EURLQ9NYK6 297 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 UPB1Q9UBR1 384 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 A0A0D9SEW6 157 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 CDC40O60508 579 aaKnown RBP eCLIP10.54□□□□□ -0.72
CLCN6-202ENST00000346436 JUNP05412 331 aaKnown RBP10.54□□□□□ -0.72
CLCN6-202ENST00000346436 POLR2CP19387 275 aaPredicted RBP10.54□□□□□ -0.72
CLCN6-202ENST00000346436 ARSDP51689 593 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 SPIBQ01892 262 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 SPNS2Q8IVW8 549 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 SLC2A13Q96QE2 648 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 AMBNQ9NP70 447 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 SRPK3Q9UPE1 567 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 BCAT2O15382 392 aaPredicted RBP10.54□□□□□ -0.72
CLCN6-202ENST00000346436 COCHO43405 550 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 B4GALT2O60909 372 aa10.54□□□□□ -0.72
CLCN6-202ENST00000346436 IRF2P14316 349 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms