RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 FAM107BQ9H098 131 aa13.21□□□□□ -0.3
TPM4-202ENST00000344824 GSTO2Q9H4Y5 243 aa13.21□□□□□ -0.3
TPM4-202ENST00000344824 SEMA4BQ9NPR2 832 aaPredicted RBP13.21□□□□□ -0.3
TPM4-202ENST00000344824 OPTCQ9UBM4 332 aa13.21□□□□□ -0.3
TPM4-202ENST00000344824 TAC3Q9UHF0 121 aa13.21□□□□□ -0.3
TPM4-202ENST00000344824 KCND3Q9UK17 655 aa13.21□□□□□ -0.3
TPM4-202ENST00000344824 PCTPQ9UKL6 214 aa13.21□□□□□ -0.3
TPM4-202ENST00000344824 TNPO3Q9Y5L0 923 aaKnown RBP13.21□□□□□ -0.3
TPM4-202ENST00000344824 KALRNO60229 2985 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 COL6A6A6NMZ7 2263 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 ZNF839A8K0R7 811 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 TMEM114B3SHH9 223 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 STK16O75716 305 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 CTSBP07858 339 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 GRK2P25098 689 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 CMPK1P30085 196 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 ARRB2P32121 409 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 HNMTP50135 292 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 RPS15P62841 145 aaKnown RBP13.2□□□□□ -0.3
TPM4-202ENST00000344824 MC1RQ01726 317 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 SLC9A5Q14940 896 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 PCBP2Q15366 365 aaKnown RBP eCLIP13.2□□□□□ -0.33e-6■■■□□ 14.6
TPM4-202ENST00000344824 TBR1Q16650 682 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 ZXDCQ2QGD7 858 aaPredicted RBP13.2□□□□□ -0.3
TPM4-202ENST00000344824 DEFB109BQ30KR1 87 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 CDKL4Q5MAI5 379 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 PCSK4Q6UW60 755 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 FRMD7Q6ZUT3 714 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 GOLGA7Q7Z5G4 137 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 ADCK2Q7Z695 626 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 LRRC34Q8IZ02 419 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 SLC38A9Q8NBW4 561 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 UBTD2Q8WUN7 234 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 SMPDL3AQ92484 453 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 C20orf27Q9GZN8 174 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 TWSG1Q9GZX9 223 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 CHST8Q9H2A9 424 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 ACTL8Q9H568 366 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 CCDC134Q9H6E4 229 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 MRPS30Q9NP92 439 aaKnown RBP13.2□□□□□ -0.3
TPM4-202ENST00000344824 TXLNGQ9NUQ3 528 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 FGFR1OP2Q9NVK5 253 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 NDOR1Q9UHB4 597 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 PLCL2Q9UPR0 1127 aa13.2□□□□□ -0.3
TPM4-202ENST00000344824 A0A0J9YVX5 310 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 K7EPI3 171 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 MEN1O00255 615 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 E2F3O00716 465 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 KLF11O14901 512 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 ZSCAN9O15535 394 aaPredicted RBP13.19□□□□□ -0.3
TPM4-202ENST00000344824 NPHS1O60500 1241 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 HBQ1P09105 142 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 FAM87AP0C7U9 286 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 KITP10721 976 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 TBPL1P62380 186 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 CLCQ05315 142 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 GTF2H2Q13888 395 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 CYP2A13Q16696 494 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 ARL13AQ5H913 290 aaPredicted RBP13.19□□□□□ -0.3
TPM4-202ENST00000344824 FAM219BQ5XKK7 198 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 FCRL6Q6DN72 434 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 GTF2H2CQ6P1K8 395 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 BORAQ6PGQ7 559 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 ATG14Q6ZNE5 492 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 LRRC70Q7Z2Q7 622 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 DSELQ8IZU8 1212 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 ENDOVQ8N8Q3 282 aaKnown RBP13.19□□□□□ -0.3
TPM4-202ENST00000344824 OR2L3Q8NG85 312 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 OR6Y1Q8NGX8 325 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 ZNF483Q8TF39 744 aaPredicted RBP13.19□□□□□ -0.3
TPM4-202ENST00000344824 ATP6V1E2Q96A05 226 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 THOC1Q96FV9 657 aaKnown RBP13.19□□□□□ -0.3
TPM4-202ENST00000344824 CHMP6Q96FZ7 201 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 DRC3Q9H069 523 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 STARD5Q9NSY2 213 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 THAP1Q9NVV9 213 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 DHCR7Q9UBM7 475 aaKnown RBP13.19□□□□□ -0.3
TPM4-202ENST00000344824 MARCOQ9UEW3 520 aaPredicted RBP13.19□□□□□ -0.3
TPM4-202ENST00000344824 SLC22A14Q9Y267 594 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 FIS1Q9Y3D6 152 aa13.19□□□□□ -0.3
TPM4-202ENST00000344824 A0A1W2PPV9 198 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 C21orf140B9A014 251 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 C9J4A7 227 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 PPP6CO00743 305 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 NRP2O60462 931 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 SNNO75324 88 aaPredicted RBP13.18□□□□□ -0.3
TPM4-202ENST00000344824 ITGB2P05107 769 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 MSL3P1P0C860 447 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 GGT5P36269 586 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 SLC6A12P48065 614 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 GABRA4P48169 554 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 VSX2P58304 361 aaPredicted RBP13.18□□□□□ -0.3
TPM4-202ENST00000344824 YBX1P67809 324 aaKnown RBP13.18□□□□□ -0.3
TPM4-202ENST00000344824 LINC00303Q3SY05 128 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 LCN10Q6JVE6 187 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 RGS9BPQ6ZS82 235 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 THOC6Q86W42 341 aaKnown RBP13.18□□□□□ -0.3
TPM4-202ENST00000344824 DNAJC22Q8N4W6 341 aa13.18□□□□□ -0.3
TPM4-202ENST00000344824 TTC29Q8NA56 475 aaPredicted RBP13.18□□□□□ -0.3
TPM4-202ENST00000344824 CNDP1Q96KN2 507 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms