RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 ZDHHC18Q9NUE0 388 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 OARD1Q9Y530 152 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 UTP20O75691 2785 aaKnown RBP13.68□□□□□ -0.22
HMGN3-202ENST00000344726 USP9YO00507 2555 aaPredicted RBP13.68□□□□□ -0.22
HMGN3-202ENST00000344726 HIVEP3Q5T1R4 2406 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 SVILO95425 2214 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 PABPN1LA6NDY0 278 aaKnown RBP13.67□□□□□ -0.22
HMGN3-202ENST00000344726 IDSB3KWA1 339 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 TCP11X1B4DZS4 312 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 JRKO75564 520 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 URI1O94763 535 aaPredicted RBP13.67□□□□□ -0.22
HMGN3-202ENST00000344726 NSA2O95478 260 aaKnown RBP13.67□□□□□ -0.22
HMGN3-202ENST00000344726 GSTA2P09210 222 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 IL1RNP18510 177 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 ITGA3P26006 1051 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 GP5P40197 560 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 CCR8P51685 355 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 CDKL1Q00532 357 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 CKAP4Q07065 602 aaKnown RBP13.67□□□□□ -0.22
HMGN3-202ENST00000344726 EFTUD2Q15029 972 aaKnown RBP eCLIP13.67□□□□□ -0.22
HMGN3-202ENST00000344726 NDUFA9Q16795 377 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 CRB2Q5IJ48 1285 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 UBAP2Q5T6F2 1119 aaKnown RBP13.67□□□□□ -0.22
HMGN3-202ENST00000344726 C8orf74Q6P047 294 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 ASPGQ86U10 573 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 THOC6Q86W42 341 aaKnown RBP13.67□□□□□ -0.22
HMGN3-202ENST00000344726 PDSS2Q86YH6 399 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 HPS6Q86YV9 775 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 PARP9Q8IXQ6 854 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 FAM26EQ8N5C1 309 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 GALNT11Q8NCW6 608 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 FBF1Q8TES7 1133 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 SLC13A3Q8WWT9 602 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 SLC5A11Q8WWX8 675 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 CDKL2Q92772 493 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 TSNARE1Q96NA8 513 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 TGIF2Q9GZN2 237 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 DERL2Q9GZP9 239 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 MKKSQ9NPJ1 570 aaPredicted RBP13.67□□□□□ -0.22
HMGN3-202ENST00000344726 CTNNAL1Q9UBT7 734 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 G3BP2Q9UN86 482 aaKnown RBP13.67□□□□□ -0.22
HMGN3-202ENST00000344726 SLC22A14Q9Y267 594 aa13.67□□□□□ -0.22
HMGN3-202ENST00000344726 MAST4O15021 2626 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 TRBC2A0A5B9 178 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 SGK494L7N484 410 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 PRPF4O43172 522 aaKnown RBP eCLIP13.66□□□□□ -0.22
HMGN3-202ENST00000344726 BMP10O95393 424 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 ANXA5P08758 320 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 RNF224P0DH78 156 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 COX6A1P12074 109 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 ACPPP15309 386 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 GDF5P43026 501 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 AVPR1BP47901 424 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 EMP2P54851 167 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 MRPL49Q13405 166 aaKnown RBP13.66□□□□□ -0.22
HMGN3-202ENST00000344726 USP10Q14694 798 aaKnown RBP13.66□□□□□ -0.22
HMGN3-202ENST00000344726 ZKSCAN8Q15776 578 aaPredicted RBP13.66□□□□□ -0.22
HMGN3-202ENST00000344726 FAAH2Q6GMR7 532 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 ADAMTSL2Q86TH1 951 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 CUZD1Q86UP6 607 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 CTAGE3PQ8IX95 158 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 CAMKVQ8NCB2 501 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 RHBDF1Q96CC6 855 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 SNRNP40Q96DI7 357 aaKnown RBP13.66□□□□□ -0.22
HMGN3-202ENST00000344726 ZNF160Q9HCG1 818 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 SLAMF7Q9NQ25 335 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 C14orf105Q9NVL8 296 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 B3GNT3Q9Y2A9 372 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 NTNG1Q9Y2I2 539 aa13.66□□□□□ -0.22
HMGN3-202ENST00000344726 A0A1W2PQ72 361 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 OR2W5A6NFC9 320 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 H0YIG0 161 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 MAP2K7O14733 419 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 TAPBPO15533 448 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 OR1F1O43749 312 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 VPS4BO75351 444 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 B3GALT4O96024 378 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 ALPPP05187 535 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 CCDC166P0CW27 439 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 CD1DP15813 335 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 GRK3P35626 688 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 SCTRP47872 440 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 SLC6A12P48065 614 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 SLC12A2P55011 1212 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 REEP5Q00765 189 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 EEF1A2Q05639 463 aaKnown RBP13.65□□□□□ -0.22
HMGN3-202ENST00000344726 CSHL1Q14406 222 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 TGFBIQ15582 683 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 OR4D1Q15615 310 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 WHAMMP3Q1A5X7 153 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 IGFL2Q6UWQ7 119 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 Q6ZS92 163 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 FRA10AC1Q70Z53 315 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 KLHDC8AQ8IYD2 350 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 PPM1NQ8N819 430 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 ANKRD53Q8N9V6 530 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 NOA1Q8NC60 698 aaKnown RBP13.65□□□□□ -0.22
HMGN3-202ENST00000344726 TSPAN17Q96FV3 270 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 EGFL8Q99944 293 aa13.65□□□□□ -0.22
HMGN3-202ENST00000344726 TMEM79Q9BSE2 394 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms