RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 REPS1Q96D71 796 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 PKP2Q99959 881 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 LHX9Q9NQ69 397 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 GPR27Q9NS67 375 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 A0A0C4DFX4 3053 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 VPS13AQ96RL7 3174 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 SPTY2D1-AS1A0A0U1RR47 76 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 ZNF839A8K0R7 811 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 OR1F1O43749 312 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 NPPAP01160 153 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 C8BP07358 591 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 PRPS1L1P21108 318 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 OXTRP30559 389 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 VHLP40337 213 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 PIK3CBP42338 1070 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 RABIFP47224 123 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 CCR8P51685 355 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 REEP5Q00765 189 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 SPIN4Q56A73 249 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 RUNDC3AQ59EK9 446 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 KIAA1614Q5VZ46 1190 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 ADCK2Q7Z695 626 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 GPR180Q86V85 440 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 ADHFE1Q8IWW8 467 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 METTL4Q8N3J2 472 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 OR10A6Q8NH74 314 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 ZNF570Q96NI8 536 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 FCRL4Q96PJ5 515 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 RHBGQ9H310 441 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 ANGPTL2Q9UKU9 493 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 A0A0G2JN53 185 aa13□□□□□ -0.33
CDC42-202ENST00000344548 C4orf51C9J302 202 aa13□□□□□ -0.33
CDC42-202ENST00000344548 DCNP07585 359 aaKnown RBP13□□□□□ -0.33
CDC42-202ENST00000344548 F3P13726 295 aa13□□□□□ -0.33
CDC42-202ENST00000344548 COX7A2P14406 83 aa13□□□□□ -0.33
CDC42-202ENST00000344548 TPP2P29144 1249 aaPredicted RBP13□□□□□ -0.33
CDC42-202ENST00000344548 KIR3DL1P43629 444 aa13□□□□□ -0.33
CDC42-202ENST00000344548 LAPTM5Q13571 262 aa13□□□□□ -0.33
CDC42-202ENST00000344548 LRRC32Q14392 662 aa13□□□□□ -0.33
CDC42-202ENST00000344548 MPEG1Q2M385 716 aa13□□□□□ -0.33
CDC42-202ENST00000344548 WASH2PQ6VEQ5 465 aa13□□□□□ -0.33
CDC42-202ENST00000344548 UBE3DQ7Z6J8 389 aa13□□□□□ -0.33
CDC42-202ENST00000344548 SLC9B2Q86UD5 537 aa13□□□□□ -0.33
CDC42-202ENST00000344548 ADGRF3Q8IZF5 1079 aa13□□□□□ -0.33
CDC42-202ENST00000344548 OR2L3Q8NG85 312 aa13□□□□□ -0.33
CDC42-202ENST00000344548 UCN3Q969E3 161 aa13□□□□□ -0.33
CDC42-202ENST00000344548 KCTD14Q9BQ13 255 aaPredicted RBP13□□□□□ -0.33
CDC42-202ENST00000344548 AIF1LQ9BQI0 150 aa13□□□□□ -0.33
CDC42-202ENST00000344548 MS4A8Q9BY19 250 aa13□□□□□ -0.33
CDC42-202ENST00000344548 KCNH6Q9H252 994 aa13□□□□□ -0.33
CDC42-202ENST00000344548 RPF2Q9H7B2 306 aaKnown RBP13□□□□□ -0.33
CDC42-202ENST00000344548 KIR3DX1Q9H7L2 352 aa13□□□□□ -0.33
CDC42-202ENST00000344548 TBC1D17Q9HA65 648 aa13□□□□□ -0.33
CDC42-202ENST00000344548 PELI2Q9HAT8 420 aa13□□□□□ -0.33
CDC42-202ENST00000344548 TRNAU1APQ9NX07 287 aaKnown RBP13□□□□□ -0.33
CDC42-202ENST00000344548 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13□□□□□ -0.33
CDC42-202ENST00000344548 RIMS3Q9UJD0 308 aa13□□□□□ -0.33
CDC42-202ENST00000344548 MAN2B2Q9Y2E5 1009 aa13□□□□□ -0.33
CDC42-202ENST00000344548 LRRC42Q9Y546 428 aa13□□□□□ -0.33
CDC42-202ENST00000344548 AK5Q9Y6K8 562 aa13□□□□□ -0.33
CDC42-202ENST00000344548 DGKBQ9Y6T7 804 aa13□□□□□ -0.33
CDC42-202ENST00000344548 DMDP11532 3685 aa13□□□□□ -0.33
CDC42-202ENST00000344548 HAT1O14929 419 aa13□□□□□ -0.33
CDC42-202ENST00000344548 SCAMP2O15127 329 aaKnown RBP13□□□□□ -0.33
CDC42-202ENST00000344548 BCL6P41182 706 aa13□□□□□ -0.33
CDC42-202ENST00000344548 CLNS1AP54105 237 aaKnown RBP13□□□□□ -0.33
CDC42-202ENST00000344548 LRIF1Q5T3J3 769 aa13□□□□□ -0.33
CDC42-202ENST00000344548 DEPDC1Q5TB30 811 aa13□□□□□ -0.33
CDC42-202ENST00000344548 DGLUCYQ7Z3D6 616 aa13□□□□□ -0.33
CDC42-202ENST00000344548 AMIGO1Q86WK6 493 aa13□□□□□ -0.33
CDC42-202ENST00000344548 ZNF761Q86XN6 746 aaPredicted RBP13□□□□□ -0.33
CDC42-202ENST00000344548 PTRH1Q86Y79 214 aaKnown RBP13□□□□□ -0.33
CDC42-202ENST00000344548 HOMEZQ8IX15 550 aa13□□□□□ -0.33
CDC42-202ENST00000344548 KRT78Q8N1N4 520 aa13□□□□□ -0.33
CDC42-202ENST00000344548 PQLC1Q8N2U9 271 aa13□□□□□ -0.33
CDC42-202ENST00000344548 DTWD1Q8N5C7 304 aa13□□□□□ -0.33
CDC42-202ENST00000344548 FLVCR1-AS1Q8TAF5 88 aa13□□□□□ -0.33
CDC42-202ENST00000344548 GPBAR1Q8TDU6 330 aa13□□□□□ -0.33
CDC42-202ENST00000344548 LCN9Q8WX39 176 aa13□□□□□ -0.33
CDC42-202ENST00000344548 DPH7Q9BTV6 452 aa13□□□□□ -0.33
CDC42-202ENST00000344548 TBCDQ9BTW9 1192 aa13□□□□□ -0.33
CDC42-202ENST00000344548 THUMPD3Q9BV44 507 aaKnown RBP13□□□□□ -0.33
CDC42-202ENST00000344548 ABCG4Q9H172 646 aa13□□□□□ -0.33
CDC42-202ENST00000344548 KLHL31Q9H511 634 aa13□□□□□ -0.33
CDC42-202ENST00000344548 AASDHPPTQ9NRN7 309 aa13□□□□□ -0.33
CDC42-202ENST00000344548 TSC22D4Q9Y3Q8 395 aa13□□□□□ -0.33
CDC42-202ENST00000344548 PCDHB11Q9Y5F2 797 aa13□□□□□ -0.33
CDC42-202ENST00000344548 MDC1Q14676 2089 aaKnown RBP13□□□□□ -0.33
CDC42-202ENST00000344548 ANKDD1BA6NHY2 528 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 STK25O00506 426 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 NVLO15381 856 aaKnown RBP12.99□□□□□ -0.33
CDC42-202ENST00000344548 RPSAP08865 295 aaKnown RBP12.99□□□□□ -0.33
CDC42-202ENST00000344548 EEFSECP57772 596 aaKnown RBP12.99□□□□□ -0.33
CDC42-202ENST00000344548 TAS2R50P59544 299 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 CYP4F3Q08477 520 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 DMWDQ09019 674 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 GPR18Q14330 331 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 KHDRBS2Q5VWX1 349 aaKnown RBP12.99□□□□□ -0.33
CDC42-202ENST00000344548 LCN8Q6JVE9 175 aa12.99□□□□□ -0.33
CDC42-202ENST00000344548 IYDQ6PHW0 289 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms