RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 HOXB6P17509 224 aaKnown RBP20.61■□□□□ 0.89
CCDC38-201ENST00000344280 CEBPBP17676 345 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 FPR1P21462 350 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 HSD3B2P26439 372 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 CD6P30203 668 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 MEF2AQ02078 507 aaPredicted RBP20.61■□□□□ 0.89
CCDC38-201ENST00000344280 IL18R1Q13478 541 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 RGNQ15493 299 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 PRSS36Q5K4E3 855 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 NPAS3Q8IXF0 933 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 KLHDC8AQ8IYD2 350 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 ZNF557Q8N988 423 aaPredicted RBP20.61■□□□□ 0.89
CCDC38-201ENST00000344280 ST13P5Q8NFI4 369 aaPredicted RBP20.61■□□□□ 0.89
CCDC38-201ENST00000344280 POP5Q969H6 163 aaKnown RBP20.61■□□□□ 0.89
CCDC38-201ENST00000344280 ERLEC1Q96DZ1 483 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 OR2AG1Q9H205 316 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 GPN2Q9H9Y4 310 aaPredicted RBP20.61■□□□□ 0.89
CCDC38-201ENST00000344280 GPATCH2Q9NW75 528 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 ERVK-18Q9QC07 812 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 KCNE2Q9Y6J6 123 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 LRRK1Q38SD2 2015 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 MGAT4DA6NG13 374 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 PCDH7O60245 1069 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 CCDC159P0C7I6 412 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 NPPBP16860 134 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 TIA1P31483 386 aaKnown RBP eCLIP20.61■□□□□ 0.89
CCDC38-201ENST00000344280 IRS1P35568 1242 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 RANBP1P43487 201 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 ARHGDIAP52565 204 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 PCDH1Q08174 1060 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 TOP3AQ13472 1001 aaPredicted RBP20.61■□□□□ 0.89
CCDC38-201ENST00000344280 IER5LQ5T953 404 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 CAPN13Q6MZZ7 669 aaPredicted RBP20.61■□□□□ 0.89
CCDC38-201ENST00000344280 ERAP2Q6P179 960 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 NLRP8Q86W28 1048 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 CCDC71Q8IV32 467 aaPredicted RBP20.61■□□□□ 0.89
CCDC38-201ENST00000344280 POF1BQ8WVV4 589 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 NXPE3Q969Y0 559 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 MAGED4Q96JG8 741 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 C7orf34Q96L11 122 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 FOPNLQ96NB1 174 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 SPNS1Q9H2V7 528 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 RAD18Q9NS91 495 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 THUMPD1Q9NXG2 353 aaKnown RBP20.61■□□□□ 0.89
CCDC38-201ENST00000344280 RAPGEFL1Q9UHV5 662 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 SNX5Q9Y5X3 404 aa20.61■□□□□ 0.89
CCDC38-201ENST00000344280 CHD9Q3L8U1 2897 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 SH3PXD2BA1X283 911 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 LILRB5O75023 590 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 CYP17A1P05093 508 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 ZNF8P17098 575 aaPredicted RBP20.6■□□□□ 0.89
CCDC38-201ENST00000344280 MAP2K4P45985 399 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 DGKGP49619 791 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 KCNJ10P78508 379 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 MC1RQ01726 317 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 VEZF1Q14119 521 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 STARD3Q14849 445 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 COX20Q5RI15 118 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 ARMCX6Q7L4S7 300 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 FAR1Q8WVX9 515 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 ABTB1Q969K4 478 aaPredicted RBP20.6■□□□□ 0.89
CCDC38-201ENST00000344280 ZNF566Q969W8 418 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 COQ8BQ96D53 544 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 DTD2Q96FN9 168 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 BTNL2Q9UIR0 455 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 DGKBQ9Y6T7 804 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 PFDN1O60925 122 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 UGT2B11O75310 529 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 BCAS1O75363 584 aaPredicted RBP20.6■□□□□ 0.89
CCDC38-201ENST00000344280 BCL10O95999 233 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 ITIH1P19827 911 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 ASMTP46597 345 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 BMXP51813 675 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 SLBPQ14493 270 aaKnown RBP eCLIP20.6■□□□□ 0.89
CCDC38-201ENST00000344280 SPIN4Q56A73 249 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 MED27Q6P2C8 311 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 TSEN54Q7Z6J9 526 aaKnown RBP20.6■□□□□ 0.89
CCDC38-201ENST00000344280 TRAPPC5Q8IUR0 188 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 CPA6Q8N4T0 437 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 TTC29Q8NA56 475 aaPredicted RBP20.6■□□□□ 0.89
CCDC38-201ENST00000344280 OR4A15Q8NGL6 344 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 COQ10AQ96MF6 247 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 RHBDL2Q9NX52 303 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 GMPPBQ9Y5P6 360 aa20.6■□□□□ 0.89
CCDC38-201ENST00000344280 TCF20Q9UGU0 1960 aaKnown RBP20.59■□□□□ 0.89
CCDC38-201ENST00000344280 ZBTB11O95625 1053 aaPredicted RBP20.59■□□□□ 0.89
CCDC38-201ENST00000344280 TGFB1P01137 390 aa20.59■□□□□ 0.89
CCDC38-201ENST00000344280 OPN1SWP03999 348 aa20.59■□□□□ 0.89
CCDC38-201ENST00000344280 TNFRSF1BP20333 461 aa20.59■□□□□ 0.89
CCDC38-201ENST00000344280 ITGA1P56199 1179 aa20.59■□□□□ 0.89
CCDC38-201ENST00000344280 HBA1P69905 142 aa20.59■□□□□ 0.89
CCDC38-201ENST00000344280 E2F2Q14209 437 aa20.59■□□□□ 0.89
CCDC38-201ENST00000344280 CRTC3Q6UUV7 619 aa20.59■□□□□ 0.89
CCDC38-201ENST00000344280 CAMKMTQ7Z624 323 aa20.59■□□□□ 0.89
CCDC38-201ENST00000344280 CROCCP3Q8IVE0 287 aa20.59■□□□□ 0.89
CCDC38-201ENST00000344280 ATG16L2Q8NAA4 619 aa20.59■□□□□ 0.89
CCDC38-201ENST00000344280 OR51B5Q9H339 312 aa20.59■□□□□ 0.89
CCDC38-201ENST00000344280 TMEM184CQ9NVA4 438 aa20.59■□□□□ 0.89
CCDC38-201ENST00000344280 SAGE1Q9NXZ1 904 aa20.59■□□□□ 0.89
CCDC38-201ENST00000344280 ZNF451Q9Y4E5 1061 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms