RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 TNIP2Q8NFZ5 429 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 CYGBQ8WWM9 190 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 FAM131CQ96AQ9 280 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 SH3KBP1Q96B97 665 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 CCDC115Q96NT0 180 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 CPPED1Q9BRF8 314 aaPredicted RBP17.89■□□□□ 0.45
HOXA9-201ENST00000343483 BDH2Q9BUT1 245 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 KAT8Q9H7Z6 458 aaKnown RBP17.89■□□□□ 0.45
HOXA9-201ENST00000343483 TAC3Q9UHF0 121 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 ACSL5Q9ULC5 683 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 F5P12259 2224 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 KLHL33A6NCF5 533 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 FOXE1O00358 373 aaPredicted RBP17.89■□□□□ 0.45
HOXA9-201ENST00000343483 PCDH7O60245 1069 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 CEACAM5P06731 702 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 MYF6P23409 242 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 PTPN6P29350 595 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 PPP2CBP62714 309 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 PPP2CAP67775 309 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 LAPTM5Q13571 262 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 SLC36A3Q495N2 470 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 C10orf62Q5T681 223 aaPredicted RBP17.89■□□□□ 0.45
HOXA9-201ENST00000343483 LCTLQ6UWM7 567 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 MSANTD1Q6ZTZ1 278 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 C12orf66Q96MD2 445 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 PANX1Q96RD7 426 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 OR51B5Q9H339 312 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 CLK4Q9HAZ1 481 aaKnown RBP17.89■□□□□ 0.45
HOXA9-201ENST00000343483 VCX3AQ9NNX9 186 aa17.89■□□□□ 0.45
HOXA9-201ENST00000343483 ELOVL7A1L3X0 281 aa17.88■□□□□ 0.45
HOXA9-201ENST00000343483 SCAMP1O15126 338 aa17.88■□□□□ 0.45
HOXA9-201ENST00000343483 ZNF23P17027 643 aa17.88■□□□□ 0.45
HOXA9-201ENST00000343483 TIA1P31483 386 aaKnown RBP eCLIP17.88■□□□□ 0.45
HOXA9-201ENST00000343483 ASMTP46597 345 aa17.88■□□□□ 0.45
HOXA9-201ENST00000343483 RPS9P46781 194 aaKnown RBP17.88■□□□□ 0.45
HOXA9-201ENST00000343483 DUOXA1Q1HG43 343 aa17.88■□□□□ 0.45
HOXA9-201ENST00000343483 FAM98BQ52LJ0 330 aaKnown RBP17.88■□□□□ 0.45
HOXA9-201ENST00000343483 PYCR3Q53H96 274 aa17.88■□□□□ 0.45
HOXA9-201ENST00000343483 MAGEE2Q8TD90 523 aaPredicted RBP17.88■□□□□ 0.45
HOXA9-201ENST00000343483 FERD3LQ96RJ6 166 aa17.88■□□□□ 0.45
HOXA9-201ENST00000343483 RBM38Q9H0Z9 239 aaKnown RBP17.88■□□□□ 0.45
HOXA9-201ENST00000343483 SMPD3Q9NY59 655 aaPredicted RBP17.88■□□□□ 0.45
HOXA9-201ENST00000343483 DMTF1Q9Y222 760 aa17.88■□□□□ 0.45
HOXA9-201ENST00000343483 AP3M1Q9Y2T2 418 aa17.88■□□□□ 0.45
HOXA9-201ENST00000343483 PLEKHM1Q9Y4G2 1056 aa17.88■□□□□ 0.45
HOXA9-201ENST00000343483 GPSM3Q9Y4H4 160 aa17.88■□□□□ 0.45
HOXA9-201ENST00000343483 FPGTO14772 594 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 SCAMP2O15127 329 aaKnown RBP17.87■□□□□ 0.45
HOXA9-201ENST00000343483 CLOCKO15516 846 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 GBAP04062 536 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 RAP2AP10114 183 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 LAMP1P11279 417 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 ERGP11308 486 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 ACADMP11310 421 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 DRD1P21728 446 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 CHRNB3Q05901 458 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 MAP7Q14244 749 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 ARHGAP19Q14CB8 494 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 CYP2A13Q16696 494 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.87■□□□□ 0.45
HOXA9-201ENST00000343483 TMIGD1Q6UXZ0 262 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 COMMD6Q7Z4G1 85 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 C17orf64Q86WR6 236 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 ZFP28Q8NHY6 868 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 STARD8Q92502 1023 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 FAM120BQ96EK7 910 aaKnown RBP17.87■□□□□ 0.45
HOXA9-201ENST00000343483 APOOQ9BUR5 198 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 GORASP2Q9H8Y8 452 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 PREBQ9HCU5 417 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 IMP3Q9NV31 184 aaKnown RBP17.87■□□□□ 0.45
HOXA9-201ENST00000343483 THEGQ9P2T0 379 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 ZNF639Q9UID6 485 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 NCKAP1Q9Y2A7 1128 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 SLC17A4Q9Y2C5 497 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 C2CD4DB7Z1M9 353 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 CACNB4O00305 520 aaPredicted RBP17.87■□□□□ 0.45
HOXA9-201ENST00000343483 HOXB9P17482 250 aaPredicted RBP17.87■□□□□ 0.45
HOXA9-201ENST00000343483 EFNA1P20827 205 aaPredicted RBP17.87■□□□□ 0.45
HOXA9-201ENST00000343483 HSD17B2P37059 387 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 HPCAL1P37235 193 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 WNT3P56703 355 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 PHEXP78562 749 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 DMPKQ09013 629 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 RBBP5Q15291 538 aaKnown RBP17.87■□□□□ 0.45
HOXA9-201ENST00000343483 IER5LQ5T953 404 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 TTC33Q6PID6 262 aaPredicted RBP17.87■□□□□ 0.45
HOXA9-201ENST00000343483 KIAA1324Q6UXG2 1013 aaKnown RBP17.87■□□□□ 0.45
HOXA9-201ENST00000343483 ARMCX6Q7L4S7 300 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.87■□□□□ 0.45
HOXA9-201ENST00000343483 CLECL1Q8IZS7 167 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 C10orf111Q8N326 155 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 ZNF786Q8N393 782 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 OR8J2Q8NGG1 315 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 UBE2E3Q969T4 207 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 NCLNQ969V3 563 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 INSM2Q96T92 566 aaPredicted RBP17.87■□□□□ 0.45
HOXA9-201ENST00000343483 TIMM29Q9BSF4 260 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 BTBD1Q9H0C5 482 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 CD93Q9NPY3 652 aa17.87■□□□□ 0.45
HOXA9-201ENST00000343483 FAM120CQ9NX05 1096 aaKnown RBP17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 108.1 ms