RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 KRCC1Q9NPI7 259 aaPredicted RBP12.14□□□□□ -0.47
SSX2IP-201ENST00000342203 GKN1Q9NS71 199 aa12.14□□□□□ -0.47
SSX2IP-201ENST00000342203 ANKRD66B4E2M5 251 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 FCGRTP55899 365 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 NKX3-2P78367 333 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 SELENBP1Q13228 472 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 TICAM1Q8IUC6 712 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 RAD51AP1Q96B01 352 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 CTRCQ99895 268 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 CXCL16Q9H2A7 254 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 SLC25A13Q9UJS0 675 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 ABCG2Q9UNQ0 655 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 MAN2B2Q9Y2E5 1009 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 HCN4Q9Y3Q4 1203 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 ACTL7AQ9Y615 435 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 CLCA1A8K7I4 914 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 OR7A10O76100 309 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 HOXD11P31277 338 aaPredicted RBP12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 PROX2Q3B8N5 592 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 ZNF691Q5VV52 312 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 ARL9Q6T311 187 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 PAMR1Q6UXH9 720 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 VASH1Q7L8A9 365 aaPredicted RBP12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 OR10H4Q8NGA5 316 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 MAELQ96JY0 434 aaKnown RBP12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 CCM2Q9BSQ5 444 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 SLC32A1Q9H598 525 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 RNF167Q9H6Y7 350 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 TXNRD2Q9NNW7 524 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 TAS2R16Q9NYV7 291 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 SDK1Q7Z5N4 2213 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 PCDH7O60245 1069 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 TBC1D19Q8N5T2 526 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 OR9Q2Q8NGE9 314 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 TNFAIP8L1Q8WVP5 186 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 ERMAPQ96PL5 475 aaPredicted RBP12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 YIPF4Q9BSR8 244 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 MAGEH1Q9H213 219 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 FAM25EA8MYX2 175 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 ACSL4O60488 711 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 SPAM1P38567 509 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 CCL23P55773 120 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 ZNF697Q5TEC3 545 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 SHQ1Q6PI26 577 aaKnown RBP12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 LHFPL3Q86UP9 236 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 ZNF655Q8N720 491 aaPredicted RBP12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 NANSQ9NR45 359 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 ENAMQ9NRM1 1142 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 GPSM3Q9Y4H4 160 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 MEIS3P2A8K0S8 358 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 CHRNA6Q15825 494 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 DPY19L1Q2PZI1 675 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 MS4A13Q5J8X5 152 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 SLC9A6Q92581 669 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 TMEM169Q96HH4 297 aa12.13□□□□□ -0.47
SSX2IP-201ENST00000342203 GABARAPO95166 117 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 ARCN1P48444 511 aaKnown RBP12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 PUDPQ08623 228 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 CATSPEREQ5SY80 951 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 PGBD2Q6P3X8 592 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 DNAJB8Q8NHS0 232 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 RAB8BQ92930 207 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 CENPOQ9BU64 300 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 AMBRA1Q9C0C7 1298 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 GPRC5BQ9NZH0 403 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 TMEM98Q9Y2Y6 226 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 PLSCR1O15162 318 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 HRH2P25021 359 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 CTU2Q2VPK5 515 aaKnown RBP12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 FAM92BQ6ZTR7 304 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 GPR78Q96P69 363 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 TSSK6Q9BXA6 273 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 MKRN2Q9H000 416 aaKnown RBP12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 ABCG5Q9H222 651 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 DCAF13Q9NV06 445 aaKnown RBP12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 RABL2AQ9UBK7 228 aaPredicted RBP12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 EXTL2Q9UBQ6 330 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 MLXQ9UH92 298 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 ENTPD4Q9Y227 616 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 H7C4K7 107 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 STOMP27105 288 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 GP2P55259 537 aaKnown RBP12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 PCBP2Q15366 365 aaKnown RBP eCLIP12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 GARNL3Q5VVW2 1013 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 MFSD6LQ8IWD5 586 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 KCNJ9Q92806 393 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 TMEM80Q96HE8 168 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 ZNF583Q96ND8 569 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 MND1Q9BWT6 205 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 HDHD5Q9BXW7 423 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 CCSER2Q9H7U1 834 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 ZNF282Q9UDV7 671 aaPredicted RBP12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 UTS2RQ9UKP6 389 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 ASF1AQ9Y294 204 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 GOLGB1Q14789 3259 aaKnown RBP12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 A0A1W2PRB8 838 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 PDYNP01213 254 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 BCHEP06276 602 aa12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 BTG3Q14201 252 aaPredicted RBP12.12□□□□□ -0.47
SSX2IP-201ENST00000342203 PCBP1Q15365 356 aaKnown RBP eCLIP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms