RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 ZKSCAN8Q15776 578 aaPredicted RBP12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 ZXDCQ2QGD7 858 aaPredicted RBP12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 VWA2Q5GFL6 755 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 ATG9BQ674R7 924 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 ZDHHC24Q6UX98 284 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 SHISA6Q6ZSJ9 500 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 CCDC91Q7Z6B0 441 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 THOC6Q86W42 341 aaKnown RBP12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 ATCAYQ86WG3 371 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 CCDC25Q86WR0 208 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 CTAGE3PQ8IX95 158 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 KLHDC8AQ8IYD2 350 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 DTWD1Q8N5C7 304 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 SLC13A3Q8WWT9 602 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 PYCR2Q96C36 320 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 OR4K3Q96R72 315 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 EGFL8Q99944 293 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 YIPF2Q9BWQ6 316 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 CAPS2Q9BXY5 557 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 LHPPQ9H008 270 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 ZNF552Q9H707 407 aaPredicted RBP12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 CNOT10Q9H9A5 744 aaKnown RBP12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 ANKHQ9HCJ1 492 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 LRRC4CQ9HCJ2 640 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 SH2B3Q9UQQ2 575 aa12.65□□□□□ -0.38
SIRPB3P-201ENST00000340424 FEZF1A0PJY2 475 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 URADA6NGE7 173 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 TTLL8A6PVC2 850 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 CXorf49A8MYA2 514 aaPredicted RBP12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 OR1F1O43749 312 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 SORBS2O94875 1100 aaKnown RBP12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 C1QAP02745 245 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 HEXBP07686 556 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 H2AFXP16104 143 aaPredicted RBP12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 GSTM2P28161 218 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 PGGT1BP53609 377 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 FOXL2P58012 376 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 RGS1Q08116 209 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 DMTNQ08495 405 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 TGFBIQ15582 683 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 TSNQ15631 228 aaKnown RBP12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 KBTBD12Q3ZCT8 623 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 NADK2Q4G0N4 442 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 GLE1Q53GS7 698 aaKnown RBP12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 SWT1Q5T5J6 900 aaKnown RBP12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 AGAP7PQ5VUJ5 663 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 JMJD6Q6NYC1 403 aaPredicted RBP12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 NDUFAF7Q7L592 441 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 TRPV3Q8NET8 790 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 OR9A4Q8NGU2 314 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 ANKRD49Q8WVL7 239 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 NEIL2Q969S2 332 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 MIB2Q96AX9 1013 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 SEC16BQ96JE7 1060 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 AGAP4Q96P64 663 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 AIF1LQ9BQI0 150 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 PITHD1Q9GZP4 211 aaPredicted RBP12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 CLK4Q9HAZ1 481 aaKnown RBP12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 SLAMF7Q9NQ25 335 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 RIC8BQ9NVN3 520 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 MTRF1LQ9UGC7 380 aaKnown RBP12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 ZFP69BQ9UJL9 534 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 IKZF3Q9UKT9 509 aa12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 MTO1Q9Y2Z2 717 aaKnown RBP12.64□□□□□ -0.39
SIRPB3P-201ENST00000340424 TNRC6AQ8NDV7 1962 aaKnown RBP12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 LOC102723996A0A087X1L8 192 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 NSG1A0A0A6YYJ2 146 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 CCDC189A1A4V9 331 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 NDUFS4O43181 175 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 LCMT2O60294 686 aaKnown RBP12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 BMP10O95393 424 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 CCDC166P0CW27 439 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 ICAM2P13598 275 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 GNAZP19086 355 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 CRABP2P29373 138 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 PHBP35232 272 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 SCTRP47872 440 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 SLC6A12P48065 614 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 REEP5Q00765 189 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 GUCY2DQ02846 1103 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 GABPB1Q06547 395 aaPredicted RBP12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 RAPSNQ13702 412 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 SLC6A19Q695T7 634 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 NXPE4Q6UWF7 544 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 IGFL2Q6UWQ7 119 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 RIPOR1Q6ZS17 1223 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 ABHD13Q7L211 337 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 RELL1Q8IUW5 271 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 ZC3H7AQ8IWR0 971 aaKnown RBP12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 KBTBD2Q8IY47 623 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 ZADH2Q8N4Q0 377 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 MMGT1Q8N4V1 131 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 RBMXL3Q8N7X1 1067 aaKnown RBP12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 TTLQ8NG68 377 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 NT5CQ8TCD5 201 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 CPT1CQ8TCG5 803 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 FBF1Q8TES7 1133 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 METTL21AQ8WXB1 218 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 RHBDF1Q96CC6 855 aa12.63□□□□□ -0.39
SIRPB3P-201ENST00000340424 UBXN10Q96LJ8 280 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms