RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 FRG2BQ96QU4 278 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 HDHD5Q9BXW7 423 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 KCNN2Q9H2S1 579 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 DPEP2Q9H4A9 486 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 HMX1Q9NP08 348 aaPredicted RBP8.44□□□□□ -1.06
RTN3-202ENST00000339997 ZDHHC4Q9NPG8 344 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 MARCH4Q9P2E8 410 aaPredicted RBP8.44□□□□□ -1.06
RTN3-202ENST00000339997 PTBP2Q9UKA9 531 aaKnown RBP8.44□□□□□ -1.06
RTN3-202ENST00000339997 HS3ST4Q9Y661 456 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 HTTP42858 3142 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 FUOMA2VDF0 154 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 INMT-MINDY4F8WBC2 141 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 L7N2F9 121 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 PLOD2O00469 737 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 AGXTP21549 392 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 CD40LGP29965 261 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 ADH7P40394 386 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 CSKP41240 450 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 BDKRB1P46663 353 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 FXYD6P3P58550 94 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 TAS2R50P59544 299 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 RPP38P78345 283 aaKnown RBP8.44□□□□□ -1.06
RTN3-202ENST00000339997 OSTM1Q86WC4 334 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 SAMD12Q8N8I0 201 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 SMPDL3BQ92485 455 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 RBM18Q96H35 190 aaKnown RBP8.44□□□□□ -1.06
RTN3-202ENST00000339997 DPCDQ9BVM2 203 aaPredicted RBP8.44□□□□□ -1.06
RTN3-202ENST00000339997 ENAMQ9NRM1 1142 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 CKLFQ9UBR5 152 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 NCKAP1Q9Y2A7 1128 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 PLEKHA6Q9Y2H5 1048 aa8.44□□□□□ -1.06
RTN3-202ENST00000339997 IGKV6D-41A0A0C4DH26 115 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 WRBO00258 174 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 C6orf47O95873 294 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 ASGR1P07306 291 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 HK1P19367 917 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 DRD5P21918 477 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 IGFBP4P22692 258 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 OPRL1P41146 370 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 HTR2BP41595 481 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 NSG1P42857 185 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 MAGEA2P43356 314 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 IL10RBQ08334 325 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 MAP2K5Q13163 448 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 MAB21L1Q13394 359 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 CCDC58Q4VC31 144 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 ZNF789Q5FWF6 425 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 ZNF678Q5SXM1 525 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 ADNP2Q6IQ32 1131 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 CHST9Q7L1S5 443 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 KCTD9Q7L273 389 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 ADGRD2Q7Z7M1 963 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 RNF130Q86XS8 419 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 CYB5D2Q8WUJ1 264 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 RFKQ969G6 155 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 MAL2Q969L2 176 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 SLC35G5Q96KT7 338 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 C7orf34Q96L11 122 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 CHMP1AQ9HD42 196 aaPredicted RBP8.43□□□□□ -1.06
RTN3-202ENST00000339997 OR2S2Q9NQN1 319 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 EIF2B3Q9NR50 452 aaKnown RBP8.43□□□□□ -1.06
RTN3-202ENST00000339997 THG1LQ9NWX6 298 aaKnown RBP8.43□□□□□ -1.06
RTN3-202ENST00000339997 TAS2R9Q9NYW1 312 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 ACSL6Q9UKU0 697 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 A6NHS1 94 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 OXSR1O95747 527 aaPredicted RBP8.43□□□□□ -1.06
RTN3-202ENST00000339997 CAPNS1P04632 268 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 SLC35E2BP0CK96 405 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 NFATC3Q12968 1075 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 PUM1Q14671 1186 aaKnown RBP eCLIP8.43□□□□□ -1.06
RTN3-202ENST00000339997 SIX1Q15475 284 aaPredicted RBP8.43□□□□□ -1.06
RTN3-202ENST00000339997 TEAD4Q15561 434 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 PRAMEF17Q5VTA0 474 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 KIAA1614Q5VZ46 1190 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 RAB12Q6IQ22 244 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 TLDC1Q6P9B6 456 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 MEX3DQ86XN8 651 aaKnown RBP8.43□□□□□ -1.06
RTN3-202ENST00000339997 CILP2Q8IUL8 1156 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 TMEM145Q8NBT3 493 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 GLB1L3Q8NCI6 653 aaPredicted RBP8.43□□□□□ -1.06
RTN3-202ENST00000339997 ZNF675Q8TD23 568 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 OTUB2Q96DC9 234 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 TSSK6Q9BXA6 273 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 LHPPQ9H008 270 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 GSKIPQ9P0R6 139 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 TNFRSF10DQ9UBN6 386 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 ZFR2Q9UPR6 939 aaKnown RBP8.43□□□□□ -1.06
RTN3-202ENST00000339997 MAN2B2Q9Y2E5 1009 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 DISP2A7MBM2 1401 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 A0A1W2PRQ8 180 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 TEX46H3BTG2 121 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 SCGB1D2O95969 90 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 SERPINA3P01011 423 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 CTNNB1P35222 781 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 ARSDP51689 593 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 ARFIP1P53367 373 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 CDH11P55287 796 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 LRP8Q14114 963 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 EFR3AQ14156 821 aa8.43□□□□□ -1.06
RTN3-202ENST00000339997 ZNF423Q2M1K9 1284 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms