RNA–Protein interactions for RNA: ENST00000339430.9

LITAF-201, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-201ENST00000339430 SLC16A8O95907 504 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 NUDT7P0C024 238 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 MAGEA2P43356 314 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 VLDLRP98155 873 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 SRSF11Q05519 484 aaKnown RBP15.72■□□□□ 0.11
LITAF-201ENST00000339430 HTR4Q13639 388 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 ZNF284Q2VY69 593 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 OR2T5Q6IEZ7 315 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 NEK10Q6ZWH5 1172 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 PTOV1Q86YD1 416 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 HOMEZQ8IX15 550 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 TRAM1L1Q8N609 369 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 C1orf52Q8N6N3 182 aaKnown RBP15.72■□□□□ 0.11
LITAF-201ENST00000339430 DDHD1Q8NEL9 900 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 OR2T29Q8NH02 315 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 CHFRQ96EP1 664 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 FCRL1Q96LA6 429 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 WRAP53Q9BUR4 548 aaKnown RBP15.72■□□□□ 0.11
LITAF-201ENST00000339430 RHBDL2Q9NX52 303 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 IL1RNP18510 177 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 TRPC1P48995 793 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 DAPP51397 102 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 ACOX1Q15067 660 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 ITPRIPL2Q3MIP1 535 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 Q7L0L9 218 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 BTN2A2Q8WVV5 523 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 TPD52L3Q96J77 140 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 IL1RAPQ9NPH3 570 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 SPATA6Q9NWH7 488 aaPredicted RBP15.72■□□□□ 0.11
LITAF-201ENST00000339430 BLOC1S6Q9UL45 172 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 RUVBL1Q9Y265 456 aaKnown RBP15.72■□□□□ 0.11
LITAF-201ENST00000339430 SNX5Q9Y5X3 404 aa15.72■□□□□ 0.11
LITAF-201ENST00000339430 PCM1Q15154 2024 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 TBC1D3BA6NDS4 549 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 NPIPB8E9PQR5 432 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 AP2A2O94973 939 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 TFPTP0C1Z6 253 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 IMPA1P29218 277 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 AQP1P29972 269 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 FMO3P31513 532 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 KDELR2P33947 212 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 SOX9P48436 509 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 TMBIM6P55061 237 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 CASP9P55211 416 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 RAE1P78406 368 aaKnown RBP15.71■□□□□ 0.11
LITAF-201ENST00000339430 TRIM74Q86UV6 250 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 HSH2DQ96JZ2 352 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 PKP4Q99569 1192 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 ZSCAN5AQ9BUG6 496 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 DUSP26Q9BV47 211 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 TMEM9Q9P0T7 183 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 IL36AQ9UHA7 158 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 COQ6Q9Y2Z9 468 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 SERTM1A2A2V5 107 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 ANHXE9PGG2 379 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 NTRK1P04629 796 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 FABP3P05413 133 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 ABCB1P08183 1280 aaPredicted RBP15.71■□□□□ 0.11
LITAF-201ENST00000339430 SRPRAP08240 638 aaKnown RBP15.71■□□□□ 0.11
LITAF-201ENST00000339430 DCDC1P59894 354 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 ST8SIA6P61647 398 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 TMEM115Q12893 351 aaPredicted RBP15.71■□□□□ 0.11
LITAF-201ENST00000339430 CDK5R2Q13319 367 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 GTF2IRD2BQ6EKJ0 949 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 GRHL2Q6ISB3 625 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 TMEM220Q6QAJ8 160 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 MSANTD1Q6ZTZ1 278 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 GTF2IRD2Q86UP8 949 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 HORMAD1Q86X24 394 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 RASGRP3Q8IV61 690 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 PIK3C3Q8NEB9 887 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 MIPOL1Q8TD10 442 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 GLYATL1Q969I3 302 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 MAL2Q969L2 176 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 AP2M1Q96CW1 435 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 CNDP2Q96KP4 475 aaKnown RBP15.71■□□□□ 0.11
LITAF-201ENST00000339430 NODALQ96S42 347 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 PDP1Q9P0J1 537 aaPredicted RBP15.71■□□□□ 0.11
LITAF-201ENST00000339430 BAG5Q9UL15 447 aa15.71■□□□□ 0.11
LITAF-201ENST00000339430 ANTXRLA6NF34 631 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 GABRR3A8MPY1 467 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 SLC16A6O15403 523 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 UGDHO60701 494 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 ATG13O75143 517 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 MYO1DO94832 1006 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 INMTO95050 263 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 CATP04040 527 aaKnown RBP15.7■□□□□ 0.1
LITAF-201ENST00000339430 GBAP04062 536 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 ANXA4P09525 319 aaPredicted RBP15.7■□□□□ 0.1
LITAF-201ENST00000339430 ELFN1P0C7U0 828 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 ACPPP15309 386 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 GPX2P18283 190 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 METAP1P53582 386 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 GABARAPL2P60520 117 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 TMPRSS11BQ86T26 416 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 DRAXINQ8NBI3 349 aaPredicted RBP15.7■□□□□ 0.1
LITAF-201ENST00000339430 OR8J2Q8NGG1 315 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 HUS1BQ8NHY5 278 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 FUNDC2Q9BWH2 189 aa15.7■□□□□ 0.1
LITAF-201ENST00000339430 UBE2ZQ9H832 354 aaPredicted RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms