RNA–Protein interactions for RNA: ENST00000338427.10

NUDCD3-201, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-201ENST00000338427 SLC16A5O15375 505 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 LRRTM2O43300 516 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 OR1F1O43749 312 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 MAN1A2O60476 641 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 TTC4O95801 387 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 SERPIND1P05546 499 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 FDXRP22570 491 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 XCR1P46094 333 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 IL2P60568 153 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 RPS15AP62244 130 aaKnown RBP12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 PDAP1Q13442 181 aaKnown RBP12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 ELOAQ14241 798 aaKnown RBP12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 TLR1Q15399 786 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 CAPN13Q6MZZ7 669 aaPredicted RBP12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 LCTLQ6UWM7 567 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 ASPGQ86U10 573 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 MFSD9Q8NBP5 474 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 HAS2Q92819 552 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 SLCO2A1Q92959 643 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 PEX11GQ96HA9 241 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 VPS50Q96JG6 964 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 UNKQ9C0B0 810 aaKnown RBP12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 AGPAT4Q9NRZ5 378 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 C14orf105Q9NVL8 296 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 ARL15Q9NXU5 204 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 STMN3Q9NZ72 180 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 SLC5A6Q9Y289 635 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 SNX24Q9Y343 169 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 NAALAD2Q9Y3Q0 740 aa12.63□□□□□ -0.39
NUDCD3-201ENST00000338427 H0YIG0 161 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 PRPF4O43172 522 aaKnown RBP eCLIP12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 CDC123O75794 336 aaPredicted RBP12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 NSA2O95478 260 aaKnown RBP12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 HIST1H2AGP0C0S8 130 aaPredicted RBP12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 C8orf89P0DMQ9 161 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 TCP1P17987 556 aaKnown RBP12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 HIST1H2ADP20671 130 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 HRH2P25021 359 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 HNF4AP41235 474 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 TNFSF10P50591 281 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 KCNK10P57789 538 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 DR1Q01658 176 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 STEAP4Q687X5 459 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 CAPN12Q6ZSI9 719 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 CPEB2Q7Z5Q1 589 aaKnown RBP12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 ANKRD37Q7Z713 158 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 PDIK1LQ8N165 341 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 CAMKVQ8NCB2 501 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 ST6GALNAC3Q8NDV1 305 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 OR4K1Q8NGD4 311 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 OR56A3Q8NH54 315 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 ANKRD49Q8WVL7 239 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 TSLPQ969D9 159 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 HIST1H2AHQ96KK5 128 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 TSNARE1Q96NA8 513 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 HIST1H2AJQ99878 128 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 H2AFJQ9BTM1 129 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 KLHL31Q9H511 634 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 SMYD2Q9NRG4 433 aa12.62□□□□□ -0.39
NUDCD3-201ENST00000338427 A0A1W2PQ72 361 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 DDAH2O95865 285 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 MST1P26927 711 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 GMPRP36959 345 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 RPL21P46778 160 aaKnown RBP12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 CCR8P51685 355 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 TAS2R39P59534 338 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 PMP22Q01453 160 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 PDIA2Q13087 525 aaKnown RBP12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 MORF4L2Q15014 288 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 DUPD1Q68J44 220 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 ZNF324BQ6AW86 544 aaPredicted RBP12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 SBSNQ6UWP8 590 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 KIAA0408Q6ZU52 694 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 SPATA6LQ8N4H0 392 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 FBXO36Q8NEA4 188 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 ABHD11Q8NFV4 315 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 METTL21AQ8WXB1 218 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 NEIL2Q969S2 332 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 FBXL8Q96CD0 374 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 THAP11Q96EK4 314 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 C5orf34Q96MH7 638 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 KRT12Q99456 494 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 NPAS2Q99743 824 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 NAT9Q9BTE0 207 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 AICDAQ9GZX7 198 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 PCBD2Q9H0N5 130 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 ANKHQ9HCJ1 492 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 LANCL2Q9NS86 450 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 RIC8BQ9NVN3 520 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 ANKRD10Q9NXR5 420 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 POLEQ07864 2286 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 CROCCQ5TZA2 2017 aa12.61□□□□□ -0.39
NUDCD3-201ENST00000338427 DYTNA2CJ06 578 aa12.6□□□□□ -0.39
NUDCD3-201ENST00000338427 NPEPPSL1A6NEC2 478 aa12.6□□□□□ -0.39
NUDCD3-201ENST00000338427 CXorf49A8MYA2 514 aaPredicted RBP12.6□□□□□ -0.39
NUDCD3-201ENST00000338427 FAM227AF5H4B4 570 aa12.6□□□□□ -0.39
NUDCD3-201ENST00000338427 CHST10O43529 356 aa12.6□□□□□ -0.39
NUDCD3-201ENST00000338427 SEC31AO94979 1220 aaKnown RBP12.6□□□□□ -0.39
NUDCD3-201ENST00000338427 UQCRHP07919 91 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms